RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 FBXO6Q9NRD1 293 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-213ENST00000485080 ASF1AQ9Y294 204 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 MED16Q9Y2X0 877 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 PCDHGA7Q9Y5G6 932 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 CACNA1BQ00975 2339 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 B4E171 279 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 HAUS5O94927 633 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 RPN2P04844 631 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 GSTA2P09210 222 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 CHRM3P20309 590 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 GABRB3P28472 473 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 RBMS1P29558 406 aaKnown RBP17.29■□□□□ 0.36
SREBF1-213ENST00000485080 CSTF2P33240 577 aaKnown RBP eCLIP17.29■□□□□ 0.36
SREBF1-213ENST00000485080 TSPAN7P41732 249 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 MPP1Q00013 466 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 ILF2Q12905 390 aaKnown RBP17.29■□□□□ 0.36
SREBF1-213ENST00000485080 BRD3Q15059 726 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 TRADDQ15628 312 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 HP1BP3Q5SSJ5 553 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-213ENST00000485080 TRMT10BQ6PF06 316 aaKnown RBP17.29■□□□□ 0.36
SREBF1-213ENST00000485080 NEK10Q6ZWH5 1172 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 OOSP2Q86WS3 158 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 ZBED8Q8IZ13 594 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 PHC3Q8NDX5 983 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 OR52E1Q8NGJ3 308 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 PYROXD1Q8WU10 500 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 CFAP36Q96G28 342 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 AARSD1Q9BTE6 412 aaKnown RBP17.29■□□□□ 0.36
SREBF1-213ENST00000485080 CCDC68Q9H2F9 335 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 THSD1Q9NS62 852 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 ZDHHC18Q9NUE0 388 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 HRASLS2Q9NWW9 162 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 ACSL6Q9UKU0 697 aa17.29■□□□□ 0.36
SREBF1-213ENST00000485080 CORO1CQ9ULV4 474 aaPredicted RBP17.29■□□□□ 0.36
SREBF1-213ENST00000485080 KMT2BQ9UMN6 2715 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-213ENST00000485080 TAF4O00268 1085 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 EIF3FO00303 357 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-213ENST00000485080 NVLO15381 856 aaKnown RBP17.28■□□□□ 0.36
SREBF1-213ENST00000485080 KDM1AO60341 852 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 AHSGP02765 367 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 MPSTP25325 297 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 GFERP55789 205 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 SLC7A5Q01650 507 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 MGAT5Q09328 741 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 TTLL9Q3SXZ7 439 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 CNSTQ6PJW8 725 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 ANKMY2Q8IV38 441 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 ZBTB2Q8N680 514 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 BMPERQ8N8U9 685 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 RCBTB1Q8NDN9 531 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 OR5AR1Q8NGP9 310 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 LCN9Q8WX39 176 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 KLHL6Q8WZ60 621 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 FGF11Q92914 225 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 ZMYND15Q9H091 742 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 SRMSQ9H3Y6 488 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 ZNF768Q9H5H4 540 aaKnown RBP17.28■□□□□ 0.36
SREBF1-213ENST00000485080 SAYSD1Q9NPB0 183 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 OR6C2Q9NZP2 312 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 DHRS7Q9Y394 339 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 PCDHGA3Q9Y5H0 932 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 CFAP47Q6ZTR5 3102 aa17.28■□□□□ 0.36
SREBF1-213ENST00000485080 PMS2P1A4D2B8 440 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 E5RI56 91 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 TNFSF15O95150 251 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 MATN4O95460 622 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 JMJD7P0C870 316 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 FGF3P11487 239 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-213ENST00000485080 SHMT2P34897 504 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 SKIV2L2P42285 1042 aaKnown RBP17.27■□□□□ 0.36
SREBF1-213ENST00000485080 CARSP49589 748 aaKnown RBP17.27■□□□□ 0.36
SREBF1-213ENST00000485080 PPM1FP49593 454 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-213ENST00000485080 CSE1LP55060 971 aaKnown RBP17.27■□□□□ 0.36
SREBF1-213ENST00000485080 SLC26A11Q86WA9 606 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 AMIGO1Q86WK6 493 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 KMT5CQ86Y97 462 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 DCUN1D3Q8IWE4 304 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 OR4E2Q8NGC2 313 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 UBXN4Q92575 508 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 INPP5DQ92835 1189 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 TGM7Q96PF1 710 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 FAM114A2Q9NRY5 505 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 GALPQ9UBC7 116 aa17.27■□□□□ 0.36
SREBF1-213ENST00000485080 DMGDHQ9UI17 866 aaKnown RBP17.27■□□□□ 0.36
SREBF1-213ENST00000485080 OR6C74A6NCV1 312 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 TLCD2A6NGC4 264 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 TPBGLP0DKB5 382 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 CBSLP0DN79 551 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 ENO3P13929 434 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-213ENST00000485080 CBSP35520 551 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 CCNFP41002 786 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 RAB15P59190 212 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 TIAL1Q01085 375 aaKnown RBP eCLIP17.26■□□□□ 0.35
SREBF1-213ENST00000485080 MC2RQ01718 297 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 GUCY2DQ02846 1103 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 PRKAA1Q13131 559 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 PRKG2Q13237 762 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 KYNUQ16719 465 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 IRGCQ6NXR0 463 aa17.26■□□□□ 0.35
SREBF1-213ENST00000485080 CEP128Q6ZU80 1094 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms