RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 DUXAA6NLW8 204 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 CAPN9O14815 690 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 PPEF2O14830 753 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 ACSL3O95573 720 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 CH25HO95992 272 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 GH1P01241 217 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 CYP1A2P05177 515 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 CSN3P07498 182 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 SPP1P10451 314 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 SAGP10523 405 aaPredicted RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 TYMPP19971 482 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 MPZP25189 248 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 CD27P26842 260 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 MAPK3P27361 379 aaPredicted RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 GMPSP49915 693 aaPredicted RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 MXI1P50539 228 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 PLCD1P51178 756 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 ADARP55265 1226 aaKnown RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 UBASH3AP57075 661 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 CD81P60033 236 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 DLK1P80370 383 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 PLA2G7Q13093 441 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 TNK1Q13470 666 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 CUL3Q13618 768 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 SETMARQ53H47 684 aaPredicted RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 LBHQ53QV2 105 aaPredicted RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 DNAJC21Q5F1R6 531 aaKnown RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 PAPPA-AS1Q5QFB9 102 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 ETFRF1Q6IPR1 90 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 TYW3Q6IPR3 259 aaKnown RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 RGMBQ6NW40 437 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 WDR73Q6P4I2 378 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 Q75L30 129 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 CTU1Q7Z7A3 348 aaKnown RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 PHLDB2Q86SQ0 1253 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 SLC9B2Q86UD5 537 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 OR5R1Q8NH85 324 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 B4GALNT2Q8NHY0 566 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 BCL2L2Q92843 193 aaPredicted RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 RIT1Q92963 219 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 COQ8BQ96D53 544 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 BSCL2Q96G97 398 aaPredicted RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 URB1-AS1Q96HZ7 61 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 NLRP4Q96MN2 994 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 QRFPRQ96P65 431 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 GAL3ST4Q96RP7 486 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 CMKLR1Q99788 373 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 TRIM7Q9C029 511 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 SLA2Q9H6Q3 261 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 PLAC1Q9HBJ0 212 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 PCDH9Q9HC56 1237 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 KLHL1Q9NR64 748 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 ANO10Q9NW15 660 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 OSER1Q9NX31 292 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 TUBA8Q9NY65 449 aaPredicted RBP4.34□□□□□ -1.71
VPS13A-211ENST00000484581 CYP39A1Q9NYL5 469 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 STX8Q9UNK0 236 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 ACEP12821 1306 aa4.34□□□□□ -1.71
VPS13A-211ENST00000484581 PTPRCP08575 1304 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 KRT87PA6NCN2 255 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 FAM90A10PA6NDY2 464 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 H0YGN5 161 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 BUD23O43709 281 aaKnown RBP4.33□□□□□ -1.72
VPS13A-211ENST00000484581 FCGR3BO75015 233 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 BCAS2O75934 225 aaPredicted RBP4.33□□□□□ -1.72
VPS13A-211ENST00000484581 DDHD2O94830 711 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 LDLRP01130 860 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 LCATP04180 440 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 PCP11498 1178 aaKnown RBP4.33□□□□□ -1.72
VPS13A-211ENST00000484581 MMP13P45452 471 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 RGS7P49802 495 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 MAPK12P53778 367 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 EVCP57679 992 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 PNRC1Q12796 327 aaPredicted RBP4.33□□□□□ -1.72
VPS13A-211ENST00000484581 TRAF1Q13077 416 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 HFEQ30201 348 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 Q4G0T1 1027 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 FSCBQ5H9T9 825 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 GRTP1Q5TC63 336 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 FAM69BQ5VUD6 431 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 Q6ZTK2 550 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 PIP4P1Q86T03 277 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 SFRP1Q8N474 314 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 HDDC3Q8N4P3 179 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 ARFGAP1Q8N6T3 406 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 SYN2Q92777 582 aaPredicted RBP4.33□□□□□ -1.72
VPS13A-211ENST00000484581 TXNDC15Q96J42 360 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 PRAM1Q96QH2 718 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 MTERF1Q99551 399 aaKnown RBP4.33□□□□□ -1.72
VPS13A-211ENST00000484581 BTBD10Q9BSF8 475 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 C1orf21Q9H246 121 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 SEMA6AQ9H2E6 1030 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 SRD5A3Q9H8P0 318 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 CDH20Q9HBT6 801 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 PDRG1Q9NUG6 133 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 COMMD8Q9NX08 183 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 SLCO1C1Q9NYB5 712 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 NPAP1Q9NZP6 1156 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 FBXL5Q9UKA1 691 aa4.33□□□□□ -1.72
VPS13A-211ENST00000484581 FBXW2Q9UKT8 454 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms