RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 ZFAND2BQ8WV99 257 aa9.41□□□□□ -0.9
CDK5RAP2-216ENST00000483412 DNAJA4Q8WW22 397 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP2-216ENST00000483412 SEC14L1Q92503 715 aa9.41□□□□□ -0.9
CDK5RAP2-216ENST00000483412 TMBIM1Q969X1 311 aa9.41□□□□□ -0.9
CDK5RAP2-216ENST00000483412 C8orf48Q96LL4 319 aa9.41□□□□□ -0.9
CDK5RAP2-216ENST00000483412 TBX5Q99593 518 aa9.41□□□□□ -0.9
CDK5RAP2-216ENST00000483412 OSER1Q9NX31 292 aa9.41□□□□□ -0.9
CDK5RAP2-216ENST00000483412 PTCH2Q9Y6C5 1203 aa9.41□□□□□ -0.9
CDK5RAP2-216ENST00000483412 AQP12BA6NM10 295 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 AURKAO14965 403 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 SERPINA3P01011 423 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 SLC35G4P0C7Q5 338 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 ZBTB48P10074 688 aaPredicted RBP9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 AMD1P17707 334 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 MAGEA12P43365 314 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 CDKL1Q00532 357 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 HSPB3Q12988 150 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 TGFBIQ15582 683 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 SPRYD7Q5W111 196 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 LCLAT1Q6UWP7 414 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 XKR5Q6UX68 686 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 AQP12AQ8IXF9 295 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 PPTC7Q8NI37 304 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 ZNF317Q96PQ6 595 aaPredicted RBP9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 GAL3ST1Q99999 423 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 BRINP2Q9C0B6 783 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 AMBNQ9NP70 447 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 FAM234BA2RU67 622 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 METTL21EPA6NDL7 271 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 XKRYO14609 159 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 TFPTP0C1Z6 253 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 CTSEP14091 401 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 ADRA1BP35368 520 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 ARF3P61204 181 aaPredicted RBP9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 ARF1P84077 181 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 OCLNQ16625 522 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 C4orf46Q504U0 113 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 PARGQ86W56 976 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 PEX5LQ8IYB4 626 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 TOP6BLQ8N6T0 577 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 PACRGLQ8N7B6 248 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 ZNF347Q96SE7 839 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 BARD1Q99728 777 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 CUEDC1Q9NWM3 386 aaPredicted RBP9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 CFL2Q9Y281 166 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 C5orf51A6NDU8 294 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 E9PAM4 449 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 CILPO75339 1184 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 ITPKBP27987 946 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 TARDBPQ13148 414 aaKnown RBP eCLIP9.4□□□□□ -0.93e-8■■■■□ 24.5
CDK5RAP2-216ENST00000483412 PRAMEF17Q5VTA0 474 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 C17orf64Q86WR6 236 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 OR2L3Q8NG85 312 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 OR10G6Q8NH81 332 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 KCTD7Q96MP8 289 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 YTHDF1Q9BYJ9 559 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 ZNF304Q9HCX3 659 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 MIOSQ9NXC5 875 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 TMED5Q9Y3A6 229 aa9.4□□□□□ -0.9
CDK5RAP2-216ENST00000483412 TCAF2A6NFQ2 919 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 PDCD5O14737 125 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 SLC6A4P31645 630 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 SLC15A1P46059 708 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TUBA3CQ13748 450 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 USF2Q15853 346 aaPredicted RBP9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TSTQ16762 297 aaKnown RBP9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 BTBD16Q32M84 506 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ZNF829Q3KNS6 432 aaPredicted RBP9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 C1orf189Q5VU69 101 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 DCAF12L1Q5VU92 463 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CEP76Q8TAP6 659 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CRELD1Q96HD1 420 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 LRRC3Q9BY71 257 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 TREM1Q9NP99 234 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 RIMKLBQ9ULI2 386 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 RPL36Q9Y3U8 105 aaKnown RBP9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ST14Q9Y5Y6 855 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 C22orf31O95567 290 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 GRM5P41594 1212 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 SLC1A2P43004 574 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ABHD15Q6UXT9 468 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 SMG8Q8ND04 991 aaKnown RBP9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ZNF548Q8NEK5 533 aaPredicted RBP9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 OR10G2Q8NGC3 310 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 BPIFB1Q8TDL5 484 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 FBXL20Q96IG2 436 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 GPR20Q99678 358 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 AIF1LQ9BQI0 150 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 COMMD4Q9H0A8 199 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 OR51V1Q9H2C8 321 aa9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 POLR3BQ9NW08 1133 aaPredicted RBP9.4□□□□□ -0.91
CDK5RAP2-216ENST00000483412 LOC100130705A0A1B0GUX0 176 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CST3P01034 146 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CCNCP24863 283 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 ECHS1P30084 290 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 RPIAP49247 311 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 CBLBQ13191 982 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 MAB21L1Q13394 359 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 DUSP28Q4G0W2 176 aa9.39□□□□□ -0.91
CDK5RAP2-216ENST00000483412 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms