RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PHYHO14832 338 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 GABARAPO95166 117 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 NSA2O95478 260 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 CLIC3O95833 236 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 PROS1P07225 676 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 TBPP20226 339 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 SLC9A3P48764 834 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 CD97P48960 835 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 POLR2JP52435 117 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 TXNL4AP83876 142 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 DNASE1L3Q13609 305 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 SLC39A4Q6P5W5 647 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 VANGL1Q8TAA9 524 aaPredicted RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 UHMK1Q8TAS1 419 aaKnown RBP5.36□□□□□ -1.55
USF3-202ENST00000478658 SLC38A4Q969I6 547 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 TWNKQ96RR1 684 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 RBM15Q96T37 977 aaKnown RBP eCLIP5.36□□□□□ -1.55
USF3-202ENST00000478658 KXD1Q9BQD3 176 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 OSBPL7Q9BZF2 842 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 NIF3L1Q9GZT8 377 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 SIAEQ9HAT2 523 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 NDUFAF4Q9P032 175 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 ERVK-18Q9QC07 812 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 PCDHGA11Q9Y5H2 935 aa5.36□□□□□ -1.55
USF3-202ENST00000478658 UMODL1Q5DID0 1318 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 MYH2Q9UKX2 1941 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ARPC4-TTLL3A0A0A6YYG9 625 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ETS1P14921 441 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 GPR143P51810 404 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 CASP9P55211 416 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 PRMT2P55345 433 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 CDH17Q12864 832 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 MTMR2Q13614 643 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ARFRP1Q13795 201 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 NTRK2Q16620 822 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 PIGGQ5H8A4 983 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 GALNT12Q8IXK2 581 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 TMEM86AQ8N2M4 240 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 FBXO36Q8NEA4 188 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ADCY4Q8NFM4 1077 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 UBALD1Q8TB05 177 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 UFD1Q92890 307 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 KAT5Q92993 513 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 DHRS9Q9BPW9 319 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 PBX4Q9BYU1 374 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 BRF2Q9HAW0 419 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ZNF334Q9HCZ1 680 aaPredicted RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 COL20A1Q9P218 1284 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 TSR3Q9UJK0 312 aaKnown RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 ITGA11Q9UKX5 1188 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ITSN1Q15811 1721 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ERBB3P21860 1342 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 H3BMQ9 156 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 TRDMT1O14717 391 aaKnown RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 TBX3O15119 743 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 PLRG1O43660 514 aaKnown RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 C1GALT1C1LP0DN25 315 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ADORA2AP29274 412 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 EEFSECP57772 596 aaKnown RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 HOXA4Q00056 320 aaPredicted RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 PCSK7Q16549 785 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 RAP1GAP2Q684P5 730 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 SLC46A3Q7Z3Q1 461 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 NUDT13Q86X67 352 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ARID3BQ8IVW6 561 aaPredicted RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 CEP97Q8IW35 865 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 SFRP1Q8N474 314 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 TMEM185BQ9H7F4 350 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 FAM49BQ9NUQ9 324 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 BARX2Q9UMQ3 279 aaPredicted RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 A0A1W2PRQ8 180 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 CCDC85CA6NKD9 419 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 SULT1C2O00338 296 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 FPGTO14772 594 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 NCK1P16333 377 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 SLC1A3P43003 542 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 MCAMP43121 646 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 CD151P48509 253 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 SLC5A3P53794 718 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 C2orf54Q08AI8 447 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 ATP1A4Q13733 1029 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 DGCR6Q14129 220 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 HERC3Q15034 1050 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 B3GNTL1Q67FW5 361 aaPredicted RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 COLGALT1Q8NBJ5 622 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 STAG3L4Q8TBR4 150 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 FRS2Q8WU20 508 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 TMEM234Q8WY98 164 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 FIG4Q92562 907 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 FAM122AQ96E09 287 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 TM9SF2Q99805 663 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 PELOQ9BRX2 385 aaKnown RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 CHRDL1Q9BU40 450 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 DGCR6LQ9BY27 220 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 CDHR5Q9HBB8 845 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 GBA2Q9HCG7 927 aaPredicted RBP5.35□□□□□ -1.55
USF3-202ENST00000478658 GDF3Q9NR23 364 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 LIMD1Q9UGP4 676 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 FKBPLQ9UIM3 349 aa5.35□□□□□ -1.55
USF3-202ENST00000478658 KDM5BQ9UGL1 1544 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms