RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 KRT14P02533 472 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 FAM87AP0C7U9 286 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 PRKAR1AP10644 381 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 ITGB6P18564 788 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 TCN2P20062 427 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 MGAT1P26572 445 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 NMBRP28336 390 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 SHMT2P34897 504 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 CDC20Q12834 499 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 GPS1Q13098 491 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 GPR19Q15760 415 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 CRTC2Q53ET0 693 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-222ENST00000477937 FBXO38Q6PIJ6 1188 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 LDB1Q86U70 411 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-222ENST00000477937 HOOK3Q86VS8 718 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 TMEM126BQ8IUX1 230 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 ADGRF3Q8IZF5 1079 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 MPP5Q8N3R9 675 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 OR5K2Q8NHB8 316 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 ASZ1Q8WWH4 475 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 ZNF501Q96CX3 271 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-222ENST00000477937 MS4A14Q96JA4 679 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 KIFC1Q9BW19 673 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 AP1M1Q9BXS5 423 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 FANCEQ9HB96 536 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 MRM3Q9HC36 420 aaKnown RBP13.39□□□□□ -0.27
HDAC7-222ENST00000477937 LHX9Q9NQ69 397 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 KCND3Q9UK17 655 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 CROTQ9UKG9 612 aa13.39□□□□□ -0.27
HDAC7-222ENST00000477937 SNRNP200O75643 2136 aaKnown RBP13.39□□□□□ -0.27
HDAC7-222ENST00000477937 TCRBV7S3A2A0A539 114 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 PIPSLA2A3N6 862 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 PGRMC1O00264 195 aaKnown RBP13.38□□□□□ -0.27
HDAC7-222ENST00000477937 NDUFS3O75489 264 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 NTRK1P04629 796 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 APOA4P06727 396 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 F8A1P23610 371 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 CCR7P32248 378 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 CCR10P46092 362 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 VPS41P49754 854 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 TERF1P54274 439 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 CSE1LP55060 971 aaKnown RBP13.38□□□□□ -0.27
HDAC7-222ENST00000477937 HSPA14Q0VDF9 509 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 KCNJ11Q14654 390 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 DNAJC21Q5F1R6 531 aaKnown RBP13.38□□□□□ -0.27
HDAC7-222ENST00000477937 PTRHD1Q6GMV3 140 aaKnown RBP13.38□□□□□ -0.27
HDAC7-222ENST00000477937 C16orf46Q6P387 395 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 TTC27Q6P3X3 843 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 CCDC137Q6PK04 289 aaKnown RBP13.38□□□□□ -0.27
HDAC7-222ENST00000477937 REXO1L1PQ8IX06 675 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 MFSD3Q96ES6 412 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 PANX3Q96QZ0 392 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 NRTNQ99748 197 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 PITPNM3Q9BZ71 974 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 ADNPQ9H2P0 1102 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 SYTL2Q9HCH5 934 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 LATS2Q9NRM7 1088 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 GEMIN8Q9NWZ8 242 aaKnown RBP13.38□□□□□ -0.27
HDAC7-222ENST00000477937 SYBUQ9NX95 663 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 ACTR10Q9NZ32 417 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 OR6C2Q9NZP2 312 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 MARCH4Q9P2E8 410 aaPredicted RBP13.38□□□□□ -0.27
HDAC7-222ENST00000477937 GNPTGQ9UJJ9 305 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 ICKQ9UPZ9 632 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 TDRKHQ9Y2W6 561 aaKnown RBP13.38□□□□□ -0.27
HDAC7-222ENST00000477937 MRPS18BQ9Y676 258 aaKnown RBP13.38□□□□□ -0.27
HDAC7-222ENST00000477937 PCM1Q15154 2024 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 KALRNO60229 2985 aa13.38□□□□□ -0.27
HDAC7-222ENST00000477937 PIEZO2Q9H5I5 2752 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 IQCF5A8MTL0 148 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 TERTO14746 1132 aaKnown RBP13.37□□□□□ -0.27
HDAC7-222ENST00000477937 KPNA5O15131 536 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 PFDN6O15212 129 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 CPNE3O75131 537 aaKnown RBP13.37□□□□□ -0.27
HDAC7-222ENST00000477937 KATNA1O75449 491 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 GPC4O75487 556 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 SCRG1O75711 98 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 VAPBO95292 243 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 MSL3P1P0C860 447 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 ST6GAL1P15907 406 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 AOAHP28039 575 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-222ENST00000477937 MAGEA6P43360 314 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 NFATC3Q12968 1075 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 TMED2Q15363 201 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 CYP1B1Q16678 543 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 KCTD19Q17RG1 926 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-222ENST00000477937 ARMC3Q5W041 872 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 MRNIPQ6NTE8 343 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 CES3Q6UWW8 571 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 UNC5AQ6ZN44 842 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 SDCCAG8Q86SQ7 713 aaPredicted RBP13.37□□□□□ -0.27
HDAC7-222ENST00000477937 LRRC6Q86X45 466 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 SLC22A15Q8IZD6 547 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 SLC35F6Q8N357 371 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 OTUD6BQ8N6M0 293 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 TRAPPC9Q96Q05 1148 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 OSBPL9Q96SU4 736 aa13.37□□□□□ -0.27
HDAC7-222ENST00000477937 SERTAD3Q9UJW9 196 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms