RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 SCRG1O75711 98 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 KLK3P07288 261 aaPredicted RBP13.39□□□□□ -0.27
TMCO1-205ENST00000476143 FOLR1P15328 257 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 ITGB6P18564 788 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 MGAT1P26572 445 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 KPNA2P52292 529 aaKnown RBP13.39□□□□□ -0.27
TMCO1-205ENST00000476143 TERF1P54274 439 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 CSE1LP55060 971 aaKnown RBP13.39□□□□□ -0.27
TMCO1-205ENST00000476143 HSPA14Q0VDF9 509 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 KCNAB1Q14722 419 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 TRIP13Q15645 432 aaPredicted RBP13.39□□□□□ -0.27
TMCO1-205ENST00000476143 C16orf46Q6P387 395 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 CCDC137Q6PK04 289 aaKnown RBP13.39□□□□□ -0.27
TMCO1-205ENST00000476143 TIPARPQ7Z3E1 657 aaKnown RBP13.39□□□□□ -0.27
TMCO1-205ENST00000476143 UNC5BQ8IZJ1 945 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 RASGEF1CQ8N431 466 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 PRELID2Q8N945 189 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 PHC3Q8NDX5 983 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 OR5K2Q8NHB8 316 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 SKA2Q8WVK7 121 aaPredicted RBP13.39□□□□□ -0.27
TMCO1-205ENST00000476143 CPT1BQ92523 772 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 ZNF778Q96MU6 729 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 FOPNLQ96NB1 174 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 SPRY4Q9C004 299 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 ADNPQ9H2P0 1102 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 XAB2Q9HCS7 855 aaKnown RBP13.39□□□□□ -0.27
TMCO1-205ENST00000476143 SERTAD3Q9UJW9 196 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 BTRCQ9Y297 605 aa13.39□□□□□ -0.27
TMCO1-205ENST00000476143 SLC5A10A0PJK1 596 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 MAGEB16A2A368 324 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 SLC9B1P1A6NJY1 282 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 C21orf140B9A014 251 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 H3BMM5 538 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 BTN3A1O00481 513 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 OR1I1O60431 355 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 PRKAR1AP10644 381 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 CYP2A7P20853 494 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 PRDX3P30048 256 aaKnown RBP13.38□□□□□ -0.27
TMCO1-205ENST00000476143 RPS15P62841 145 aaKnown RBP13.38□□□□□ -0.27
TMCO1-205ENST00000476143 CYP4F2P78329 520 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 CRADDP78560 199 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 CDC20Q12834 499 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 PPP1R7Q15435 360 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 TBR1Q16650 682 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 CRTC2Q53ET0 693 aaPredicted RBP13.38□□□□□ -0.27
TMCO1-205ENST00000476143 PCSK4Q6UW60 755 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 ZNF534Q76KX8 674 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 OTOAQ7RTW8 1153 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 GPR135Q8IZ08 494 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 SLC35F6Q8N357 371 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 ZNF843Q8N446 348 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 OR5AR1Q8NGP9 310 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
TMCO1-205ENST00000476143 CLIP3Q96DZ5 547 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 KIFC1Q9BW19 673 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 RAB11FIP5Q9BXF6 653 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 AP1M1Q9BXS5 423 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 LHX9Q9NQ69 397 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 LATS2Q9NRM7 1088 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 TREX1Q9NSU2 369 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 SYBUQ9NX95 663 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 ACTR10Q9NZ32 417 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 OR6C2Q9NZP2 312 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 CROTQ9UKG9 612 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 SOX13Q9UN79 622 aa13.38□□□□□ -0.27
TMCO1-205ENST00000476143 ISM1B1AKI9 464 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 PHF2O75151 1096 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 VAPBO95292 243 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 HBQ1P09105 142 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 MLNP12872 115 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 ZNF28P17035 718 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 WT1P19544 449 aaPredicted RBP13.37□□□□□ -0.27
TMCO1-205ENST00000476143 RPS3P23396 243 aaKnown RBP eCLIP13.37□□□□□ -0.275e-9■■■■■ 32.9
TMCO1-205ENST00000476143 NMBRP28336 390 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
TMCO1-205ENST00000476143 FNTAP49354 379 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 EIF3BP55884 814 aaKnown RBP13.37□□□□□ -0.27
TMCO1-205ENST00000476143 THOC5Q13769 683 aaKnown RBP13.37□□□□□ -0.27
TMCO1-205ENST00000476143 GPR19Q15760 415 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 ZNF658BQ4V348 819 aaPredicted RBP13.37□□□□□ -0.27
TMCO1-205ENST00000476143 PWWP2BQ6NUJ5 590 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 UNC5DQ6UXZ4 953 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 DCUN1D3Q8IWE4 304 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 SLC22A15Q8IZD6 547 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 CFAP61Q8NHU2 1237 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 MAGEC3Q8TD91 643 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 ACTRT1Q8TDG2 376 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 SLC22A18Q96BI1 424 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 OSBPL9Q96SU4 736 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 TCF12Q99081 682 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 CCDC68Q9H2F9 335 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 XKR8Q9H6D3 395 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 IRAK4Q9NWZ3 460 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 SLC39A10Q9ULF5 831 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 NBEAQ8NFP9 2946 aa13.37□□□□□ -0.27
TMCO1-205ENST00000476143 SDR42E2A6NKP2 422 aa13.36□□□□□ -0.27
TMCO1-205ENST00000476143 B8ZZF3 427 aa13.36□□□□□ -0.27
TMCO1-205ENST00000476143 TMEM150CB9EJG8 249 aa13.36□□□□□ -0.27
TMCO1-205ENST00000476143 E5RI56 91 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms