RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 DCBLD1Q8N8Z6 715 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 L3MBTL4Q8NA19 623 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 TMIEQ8NEW7 156 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 OR2T34Q8NGX1 318 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 OR2T3Q8NH03 318 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 UCMAQ8WVF2 138 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 SCAMP4Q969E2 229 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 ATP6V1E2Q96A05 226 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 SLCO4A1Q96BD0 722 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 FBXL8Q96CD0 374 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 DTD2Q96FN9 168 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 DCUN1D1Q96GG9 259 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 MAGEB10Q96LZ2 347 aaPredicted RBP9.6□□□□□ -0.87
USP39-214ENST00000474572 PKP2Q99959 881 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 SLC39A3Q9BRY0 314 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 ABCG8Q9H221 673 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 EPHX3Q9H6B9 360 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 SFXN1Q9H9B4 322 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 ARMC1Q9NVT9 282 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 ACTR3BQ9P1U1 418 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 CD84Q9UIB8 345 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 DTNAQ9Y4J8 743 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 NEUROG3Q9Y4Z2 214 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 ANGPTL3Q9Y5C1 460 aa9.6□□□□□ -0.87
USP39-214ENST00000474572 ZFC3H1O60293 1989 aaKnown RBP9.6□□□□□ -0.87
USP39-214ENST00000474572 KIAA0100Q14667 2235 aaKnown RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 SLC5A10A0PJK1 596 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 PRRT4C9JH25 899 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 MANBAO00462 879 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 AREL1O15033 823 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 PSIP1O75475 530 aaKnown RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 RSL1D1O76021 490 aaKnown RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 CLDN9O95484 217 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 SOD1P00441 154 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 PRNPP04156 253 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 CA3P07451 260 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 G6PDP11413 515 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 TCN1P20061 433 aaPredicted RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 ATP6V1B2P21281 511 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 FCARP24071 287 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 ITGB7P26010 798 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 HTR1EP28566 365 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 AKT1P31749 480 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 ETV3P41162 512 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 MAPK9P45984 424 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 CLCN2P51788 898 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 HNRNPFP52597 415 aaKnown RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 AQP4P55087 323 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 ST8SIA6P61647 398 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 YBX1P67809 324 aaKnown RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 NFYCQ13952 458 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 E2F2Q14209 437 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 AP5B1Q2VPB7 878 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 HNRNPA1L2Q32P51 320 aaKnown RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 RFTN2Q52LD8 501 aaPredicted RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 FAM78AQ5JUQ0 283 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 RARS2Q5T160 578 aaKnown RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 IL23RQ5VWK5 629 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 ERAP2Q6P179 960 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 NEK5Q6P3R8 708 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 NLRP8Q86W28 1048 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 APLFQ8IW19 511 aaPredicted RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 GLB1L3Q8NCI6 653 aaPredicted RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 FBXO15Q8NCQ5 510 aaPredicted RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 SMARCD2Q92925 531 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 GLYATL1Q969I3 302 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 NXPE3Q969Y0 559 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 ARRDC3Q96B67 414 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 SLC45A3Q96JT2 553 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 FCRL1Q96LA6 429 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 LRGUKQ96M69 825 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 C1orf50Q9BV19 199 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 RIOK2Q9BVS4 552 aaKnown RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 TMEM245Q9H330 911 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 MTG2Q9H4K7 406 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 EBF3Q9H4W6 596 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 COPS7BQ9H9Q2 264 aaPredicted RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 PIDD1Q9HB75 910 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 ARL15Q9NXU5 204 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 RNF11Q9Y3C5 154 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 POLR3HQ9Y535 204 aaPredicted RBP9.59□□□□□ -0.87
USP39-214ENST00000474572 AP4S1Q9Y587 144 aa9.59□□□□□ -0.87
USP39-214ENST00000474572 EDDM13A0A1B0GTR0 161 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 TCRBV5S2A0A599 114 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 C9JVG2 144 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 WNT9AO14904 365 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 DENRO43583 198 aaKnown RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 AP1G1O43747 822 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 UGDHO60701 494 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 DNAJA2O60884 412 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 ULK1O75385 1050 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 KRT6AP02538 564 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 KRT6BP04259 564 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 HIST1H2AGP0C0S8 130 aaPredicted RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 ELFN1P0C7U0 828 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 HIST1H2ADP20671 130 aa9.58□□□□□ -0.88
USP39-214ENST00000474572 XPAP23025 273 aaPredicted RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 VARSP26640 1264 aaKnown RBP9.58□□□□□ -0.88
USP39-214ENST00000474572 VIPR2P41587 438 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms