RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 KIFC1Q9BW19 673 aa19.89■□□□□ 0.77
SNX13-206ENST00000474067 RAB11FIP5Q9BXF6 653 aa19.89■□□□□ 0.77
SNX13-206ENST00000474067 TREX1Q9NSU2 369 aa19.89■□□□□ 0.77
SNX13-206ENST00000474067 SLC2A6Q9UGQ3 507 aa19.89■□□□□ 0.77
SNX13-206ENST00000474067 TUBD1Q9UJT1 453 aa19.89■□□□□ 0.77
SNX13-206ENST00000474067 SERTAD3Q9UJW9 196 aa19.89■□□□□ 0.77
SNX13-206ENST00000474067 SOX13Q9UN79 622 aa19.89■□□□□ 0.77
SNX13-206ENST00000474067 HBQ1P09105 142 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 TCP1P17987 556 aaKnown RBP19.88■□□□□ 0.77
SNX13-206ENST00000474067 RPS3P23396 243 aaKnown RBP eCLIP19.88■□□□□ 0.77
SNX13-206ENST00000474067 PRDX3P30048 256 aaKnown RBP19.88■□□□□ 0.77
SNX13-206ENST00000474067 DLSTP36957 453 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 MAGEA6P43360 314 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 KPNA2P52292 529 aaKnown RBP19.88■□□□□ 0.77
SNX13-206ENST00000474067 COL9A2Q14055 689 aaPredicted RBP19.88■□□□□ 0.77
SNX13-206ENST00000474067 CYP1B1Q16678 543 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 CASC4Q6P4E1 433 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 UNC5DQ6UXZ4 953 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 ZNF534Q76KX8 674 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 TIPARPQ7Z3E1 657 aaKnown RBP19.88■□□□□ 0.77
SNX13-206ENST00000474067 MAGEC3Q8TD91 643 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 CPT1BQ92523 772 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 ELMO2Q96JJ3 720 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 ZNF778Q96MU6 729 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 FOPNLQ96NB1 174 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 GPR87Q9BY21 358 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 SLC7A5P2Q9GIP4 190 aa19.88■□□□□ 0.77
SNX13-206ENST00000474067 PIKFYVEQ9Y2I7 2098 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 LOC101059948A0A1B0GTJ6 334 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 SCRG1O75711 98 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 EBLN1P0CF75 366 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 FOLR1P15328 257 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 MGAT1P26572 445 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 RPS15P62841 145 aaKnown RBP19.87■□□□□ 0.77
SNX13-206ENST00000474067 HSPA14Q0VDF9 509 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 CDC20Q12834 499 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 SRSF6Q13247 344 aaKnown RBP19.87■□□□□ 0.77
SNX13-206ENST00000474067 KIR2DS3Q14952 304 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 BRD3Q15059 726 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 OTOAQ7RTW8 1153 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 LMNTD2Q8IXW0 634 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 SLC22A15Q8IZD6 547 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 GALNT6Q8NCL4 622 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 PHC3Q8NDX5 983 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 EXTL1Q92935 676 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 LRFN5Q96NI6 719 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 OSBPL9Q96SU4 736 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 AP1M1Q9BXS5 423 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 PITPNM3Q9BZ71 974 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 LHX9Q9NQ69 397 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 ACTR10Q9NZ32 417 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 TDRKHQ9Y2W6 561 aaKnown RBP19.87■□□□□ 0.77
SNX13-206ENST00000474067 PCDHGA6Q9Y5G7 932 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 HEMK1Q9Y5R4 338 aaPredicted RBP19.87■□□□□ 0.77
SNX13-206ENST00000474067 PRSS21Q9Y6M0 314 aa19.87■□□□□ 0.77
SNX13-206ENST00000474067 BTN3A1O00481 513 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 OR1I1O60431 355 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 PHF2O75151 1096 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 OGNP20774 298 aaKnown RBP19.86■□□□□ 0.77
SNX13-206ENST00000474067 ACADLP28330 430 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 COILP38432 576 aaPredicted RBP19.86■□□□□ 0.77
SNX13-206ENST00000474067 PPP1CAP62136 330 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 PRKG2Q13237 762 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 LY6DQ14210 128 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 KCNJ11Q14654 390 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 TBR1Q16650 682 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 KIAA0930Q6ICG6 404 aaPredicted RBP19.86■□□□□ 0.77
SNX13-206ENST00000474067 SPESP1Q6UW49 350 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 PCSK4Q6UW60 755 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 PCGF5Q86SE9 256 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 DCUN1D3Q8IWE4 304 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 GPR135Q8IZ08 494 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 ZNF843Q8N446 348 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 MCUQ8NE86 351 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 TCTN2Q96GX1 697 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 RUNDC3BQ96NL0 473 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 C17orf62Q9BQA9 187 aa19.86■□□□□ 0.77
SNX13-206ENST00000474067 INTS7Q9NVH2 962 aaKnown RBP19.86■□□□□ 0.77
SNX13-206ENST00000474067 SLC9B1P1A6NJY1 282 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 SDR42E2A6NKP2 422 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 VAPBO95292 243 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 FKBP9O95302 570 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 ESR1P03372 595 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 CYP2A7P20853 494 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 VPS41P49754 854 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 ADARP55265 1226 aaKnown RBP19.85■□□□□ 0.77
SNX13-206ENST00000474067 TRIP13Q15645 432 aaPredicted RBP19.85■□□□□ 0.77
SNX13-206ENST00000474067 PLEKHS1Q5SXH7 462 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 PWWP2BQ6NUJ5 590 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 SLC35F6Q8N357 371 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 OR5AR1Q8NGP9 310 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 CALML6Q8TD86 181 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 APOBEC4Q8WW27 367 aaKnown RBP19.85■□□□□ 0.77
SNX13-206ENST00000474067 ZNF501Q96CX3 271 aaPredicted RBP19.85■□□□□ 0.77
SNX13-206ENST00000474067 DPH2Q9BQC3 489 aaPredicted RBP19.85■□□□□ 0.77
SNX13-206ENST00000474067 CHRNA10Q9GZZ6 450 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 GEMIN8Q9NWZ8 242 aaKnown RBP19.85■□□□□ 0.77
SNX13-206ENST00000474067 SYBUQ9NX95 663 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 CROTQ9UKG9 612 aa19.85■□□□□ 0.77
SNX13-206ENST00000474067 SNX12Q9UMY4 172 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms