RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 FSCN3Q9NQT6 498 aa7.43□□□□□ -1.22
CCDC93-207ENST00000474006 SNX15Q9NRS6 342 aa7.43□□□□□ -1.22
CCDC93-207ENST00000474006 TRNAU1APQ9NX07 287 aaKnown RBP7.43□□□□□ -1.22
CCDC93-207ENST00000474006 SLC6A14Q9UN76 642 aa7.43□□□□□ -1.22
CCDC93-207ENST00000474006 RUVBL2Q9Y230 463 aaKnown RBP7.43□□□□□ -1.22
CCDC93-207ENST00000474006 KCNK6Q9Y257 313 aa7.43□□□□□ -1.22
CCDC93-207ENST00000474006 DNAJC16Q9Y2G8 782 aa7.43□□□□□ -1.22
CCDC93-207ENST00000474006 ACOT9Q9Y305 439 aa7.43□□□□□ -1.22
CCDC93-207ENST00000474006 PCDHGA5Q9Y5G8 931 aa7.43□□□□□ -1.22
CCDC93-207ENST00000474006 BPTFQ12830 3046 aa7.43□□□□□ -1.22
CCDC93-207ENST00000474006 CACNA1IQ9P0X4 2223 aa7.43□□□□□ -1.22
CCDC93-207ENST00000474006 A0A087X1B8 175 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 A0A096LPE4 126 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 A0A1W2PPZ6 126 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 KLHL33A6NCF5 533 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 LIN7AO14910 233 aaPredicted RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 SNX2O60749 519 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 SMNDC1O75940 238 aaKnown RBP eCLIP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 EPN2O95208 641 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 APOA4P06727 396 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 SLC35E2BP0CK96 405 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 CCDC166P0CW27 439 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 NME1P15531 152 aaKnown RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 CREB1P16220 341 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 VCLP18206 1134 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 KRT4P19013 534 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 IDSP22304 550 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 AK4P27144 223 aaPredicted RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 ADH7P40394 386 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 SLC26A3P40879 764 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 MAGEA12P43365 314 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 PREPP48147 710 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 CLCNKAP51800 687 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 IL2P60568 153 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 HNRNPKP61978 463 aaKnown RBP eCLIP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 IRX4P78413 519 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 IRF9Q00978 393 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 PLOD1Q02809 727 aaPredicted RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 SLC18A2Q05940 514 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 ABRQ12979 859 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 BNIP3Q12983 259 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 LRP8Q14114 963 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 BOP1Q14137 746 aaKnown RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 SHBQ15464 509 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 PRRT3Q5FWE3 981 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 AGBL2Q5U5Z8 902 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 LAIR1Q6GTX8 287 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 CCDC91Q7Z6B0 441 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 RABEPKQ7Z6M1 372 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 TAF8Q7Z7C8 310 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 EXOC3L1Q86VI1 746 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 SRRM1Q8IYB3 904 aaKnown RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 CPNE9Q8IYJ1 553 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 C4orf33Q8N1A6 199 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 PLD6Q8N2A8 252 aaKnown RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 OXR1Q8N573 874 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 NKAPQ8N5F7 415 aaKnown RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 GOLGA6L1Q8N7Z2 621 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 HM13Q8TCT9 377 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 CD200R1Q8TD46 325 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 ACMSDQ8TDX5 336 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 TMEM159Q96B96 161 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 NXNL1Q96CM4 212 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 PDLIM5Q96HC4 596 aaKnown RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 TIMM29Q9BSF4 260 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 ACBD3Q9H3P7 528 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 SMOC1Q9H4F8 434 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 COG4Q9H9E3 785 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 POPDC3Q9HBV1 291 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 CAPN10Q9HC96 672 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 PRDM8Q9NQV8 689 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 FRRS1LQ9P0K9 344 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 APOBEC3BQ9UH17 382 aaKnown RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 DCDC2Q9UHG0 476 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 ACSL5Q9ULC5 683 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 SMG5Q9UPR3 1016 aaKnown RBP7.42□□□□□ -1.22
CCDC93-207ENST00000474006 CDYLQ9Y232 598 aa7.42□□□□□ -1.22
CCDC93-207ENST00000474006 TRBV23OR9-2A0A075B6M9 112 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 PRR19A6NJB7 356 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 YY2O15391 372 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 SPAG7O75391 227 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 KLHL2O95198 593 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 TSPAN12O95859 305 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 RETP07949 1114 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 CELA2BP08218 269 aaPredicted RBP7.41□□□□□ -1.22
CCDC93-207ENST00000474006 SYPP08247 313 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 CBSLP0DN79 551 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 COL6A2P12110 1019 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 ZNF37AP17032 561 aaPredicted RBP7.41□□□□□ -1.22
CCDC93-207ENST00000474006 RPL10P27635 214 aaKnown RBP7.41□□□□□ -1.22
CCDC93-207ENST00000474006 ATP5DP30049 168 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 CRHR1P34998 444 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 CBSP35520 551 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 MPLP40238 635 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 ACTR1BP42025 376 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 RXRGP48443 463 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 CCT5P48643 541 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 RGS4P49798 205 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 ACTR1AP61163 376 aa7.41□□□□□ -1.22
CCDC93-207ENST00000474006 MAGOHP61326 146 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms