RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 TRUB2O95900 331 aaKnown RBP3.98□□□□□ -1.77
LRCH3-211ENST00000466054 MYBL1P10243 752 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 NR1D1P20393 614 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 EEF1DP29692 281 aaKnown RBP3.98□□□□□ -1.77
LRCH3-211ENST00000466054 THOP1P52888 689 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 PHEXP78562 749 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 PRKAA1Q13131 559 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 RBM39Q14498 530 aaKnown RBP3.98□□□□□ -1.77
LRCH3-211ENST00000466054 SLC27A1Q6PCB7 646 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 FAM198BQ6UWH4 519 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 TRMT1LQ7Z2T5 733 aaKnown RBP3.98□□□□□ -1.77
LRCH3-211ENST00000466054 DCUN1D3Q8IWE4 304 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 MAML2Q8IZL2 1156 aaPredicted RBP3.98□□□□□ -1.77
LRCH3-211ENST00000466054 CRYBG2Q8N1P7 616 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 CIARTQ8N365 385 aaPredicted RBP3.98□□□□□ -1.77
LRCH3-211ENST00000466054 TTC30BQ8N4P2 665 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 TDRD5Q8NAT2 981 aaKnown RBP3.98□□□□□ -1.77
LRCH3-211ENST00000466054 CCDC191Q8NCU4 936 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 KLHDC9Q8NEP7 349 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 OR2T12Q8NG77 320 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 CFAP57Q96MR6 1250 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 SEPHS2Q99611 448 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 GPR88Q9GZN0 384 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 NOL11Q9H8H0 719 aaKnown RBP3.98□□□□□ -1.77
LRCH3-211ENST00000466054 ACKR4Q9NPB9 350 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 OSGIN1Q9UJX0 560 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 JRKLQ9Y4A0 524 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 KIF26BQ2KJY2 2108 aa3.98□□□□□ -1.77
LRCH3-211ENST00000466054 EDDM13A0A1B0GTR0 161 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 A0A1W2PRB8 838 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 TMEM221A6NGB7 291 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 LMX1BO60663 402 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 TOMM70O94826 608 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 TBX6O95947 436 aaPredicted RBP3.97□□□□□ -1.77
LRCH3-211ENST00000466054 MSH3P20585 1137 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 DCTP40126 519 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 MTHFRP42898 656 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 CSE1LP55060 971 aaKnown RBP3.97□□□□□ -1.77
LRCH3-211ENST00000466054 ARMC4Q5T2S8 1044 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 STPG1Q5TH74 334 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 TMPRSS11FQ6ZWK6 438 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 PLPPR4Q7Z2D5 763 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 PLD3Q8IV08 490 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 ZNF595Q8IYB9 648 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 RNF128Q8TEB7 428 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 TEKT4Q8WW24 435 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 ALG14Q96F25 216 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 STAMBPL1Q96FJ0 436 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 OLFM1Q99784 485 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 VN1R1Q9GZP7 353 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 ARRDC1-AS1Q9H2J1 176 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 GOLPH3LQ9H4A5 285 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 OPA3Q9H6K4 179 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 COQ3Q9NZJ6 369 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 BCCIPQ9P287 314 aaKnown RBP eCLIP3.97□□□□□ -1.77
LRCH3-211ENST00000466054 NRBP1Q9UHY1 535 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 ACAD8Q9UKU7 415 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 SLC7A7Q9UM01 511 aa3.97□□□□□ -1.77
LRCH3-211ENST00000466054 SOS1Q07889 1333 aaPredicted RBP3.96□□□□□ -1.77
LRCH3-211ENST00000466054 HYKKA2RU49 373 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 A8MXE2 369 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 FAM72CH0Y354 149 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 SYNCRIPO60506 623 aaKnown RBP3.96□□□□□ -1.78
LRCH3-211ENST00000466054 DKC1O60832 514 aaKnown RBP eCLIP3.96□□□□□ -1.78
LRCH3-211ENST00000466054 RNASEH1O60930 286 aaKnown RBP3.96□□□□□ -1.78
LRCH3-211ENST00000466054 PSMD10O75832 226 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 NR3C1P04150 777 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 PRSS1P07477 247 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 ACP2P11117 423 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 DNASE1P24855 282 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 PRKCZQ05513 592 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 PTPRCAPQ14761 206 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 LETM2Q2VYF4 491 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 TECRLQ5HYJ1 363 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 FAM72AQ5TYM5 149 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 CST9LP1Q5W188 147 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 FAM72DQ6L9T8 149 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 RBPMS2Q6ZRY4 209 aaKnown RBP3.96□□□□□ -1.78
LRCH3-211ENST00000466054 SLC26A9Q7LBE3 791 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 DGLUCYQ7Z3D6 616 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 ZNF554Q86TJ5 538 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 FAM72BQ86X60 149 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 COMMD2Q86X83 199 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 CEP57L1Q8IYX8 460 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 XXYLT1Q8NBI6 393 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 ZNF653Q96CK0 615 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 NXNL1Q96CM4 212 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 SPDL1Q96EA4 605 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 SLC47A1Q96FL8 570 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 PRMT7Q9NVM4 692 aaPredicted RBP3.96□□□□□ -1.78
LRCH3-211ENST00000466054 OSER1Q9NX31 292 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 NFKBIL1Q9UBC1 381 aaPredicted RBP3.96□□□□□ -1.78
LRCH3-211ENST00000466054 CFDP1Q9UEE9 299 aaPredicted RBP3.96□□□□□ -1.78
LRCH3-211ENST00000466054 SLC24A2Q9UI40 661 aa3.96□□□□□ -1.78
LRCH3-211ENST00000466054 IGKV3D-20A0A0C4DH25 116 aa3.95□□□□□ -1.78
LRCH3-211ENST00000466054 FEZF1A0PJY2 475 aa3.95□□□□□ -1.78
LRCH3-211ENST00000466054 E9PI62 339 aa3.95□□□□□ -1.78
LRCH3-211ENST00000466054 TBX10O75333 385 aa3.95□□□□□ -1.78
LRCH3-211ENST00000466054 SLC22A3O75751 556 aa3.95□□□□□ -1.78
LRCH3-211ENST00000466054 CAVIN2O95810 425 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms