RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZNF501Q96CX3 271 aaPredicted RBP21.13■□□□□ 0.97
LIME1-203ENST00000465591 MFSD3Q96ES6 412 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 BFARQ9NZS9 450 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 CDYLQ9Y232 598 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 ASF1AQ9Y294 204 aa21.13■□□□□ 0.97
LIME1-203ENST00000465591 BSNQ9UPA5 3926 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.12■□□□□ 0.97
LIME1-203ENST00000465591 CD3EAPO15446 510 aaKnown RBP21.12■□□□□ 0.97
LIME1-203ENST00000465591 AVILO75366 819 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 NTRK1P04629 796 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 PVRP15151 417 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 ST6GAL1P15907 406 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 CDH3P22223 829 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 OAS2P29728 719 aaKnown RBP21.12■□□□□ 0.97
LIME1-203ENST00000465591 DLSTP36957 453 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 GPS1Q13098 491 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 SYTL3Q4VX76 610 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 PRAMEF17Q5VTA0 474 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 MAGOHBQ96A72 148 aaKnown RBP21.12■□□□□ 0.97
LIME1-203ENST00000465591 STAMBPL1Q96FJ0 436 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 PBKQ96KB5 322 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 TTC1Q99614 292 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 ARHGAP9Q9BRR9 750 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 KIFC1Q9BW19 673 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 PITPNM3Q9BZ71 974 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 KLHL25Q9H0H3 589 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 C1GALT1Q9NS00 363 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 SOHLH2Q9NX45 425 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 PLAGL1Q9UM63 463 aa21.12■□□□□ 0.97
LIME1-203ENST00000465591 TMEM63AO94886 807 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 KRT14P02533 472 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 MAGEA6P43360 314 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 TUBB4BP68371 445 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 CDK16Q00536 496 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 CDC20Q12834 499 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 TUBB2AQ13885 445 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 CARFQ8N187 725 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 MPP5Q8N3R9 675 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 RUFY1Q96T51 708 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 TRIM56Q9BRZ2 755 aaKnown RBP21.11■□□□□ 0.97
LIME1-203ENST00000465591 TUBB2BQ9BVA1 445 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 P2RY12Q9H244 342 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 ACTR10Q9NZ32 417 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 NEU2Q9Y3R4 380 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 FER1L5A0AVI2 2057 aa21.11■□□□□ 0.97
LIME1-203ENST00000465591 GOLGA8KD6RF30 607 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 GOLGA8TH3BQL2 631 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 MATN2O00339 956 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 PRMT5O14744 637 aaPredicted RBP21.1■□□□□ 0.97
LIME1-203ENST00000465591 GPC4O75487 556 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 COILP38432 576 aaPredicted RBP21.1■□□□□ 0.97
LIME1-203ENST00000465591 HSPA14Q0VDF9 509 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 CYP1B1Q16678 543 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 UNC5AQ6ZN44 842 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 TRIM73Q86UV7 250 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 CAND1Q86VP6 1230 aaKnown RBP21.1■□□□□ 0.97
LIME1-203ENST00000465591 TBC1D21Q8IYX1 336 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 SLC22A15Q8IZD6 547 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 SLC38A9Q8NBW4 561 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 OR5K2Q8NHB8 316 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 FLVCR1-AS1Q8TAF5 88 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 CT55Q8WUE5 264 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 CPT1BQ92523 772 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 FCRL4Q96PJ5 515 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 EFHD1Q9BUP0 239 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 CARD6Q9BX69 1037 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 TWSG1Q9GZX9 223 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 MRM3Q9HC36 420 aaKnown RBP21.1■□□□□ 0.97
LIME1-203ENST00000465591 LHX9Q9NQ69 397 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 SPHK1Q9NYA1 384 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 ANAPC5Q9UJX4 755 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 SOX13Q9UN79 622 aa21.1■□□□□ 0.97
LIME1-203ENST00000465591 TDRKHQ9Y2W6 561 aaKnown RBP21.1■□□□□ 0.97
LIME1-203ENST00000465591 VAPBO95292 243 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 FURINP09958 794 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 PLA2G2AP14555 144 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 ABRQ12979 859 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 ZNF789Q5FWF6 425 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 AARS2Q5JTZ9 985 aaKnown RBP21.09■□□□□ 0.97
LIME1-203ENST00000465591 C16orf46Q6P387 395 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 CYB5D1Q6P9G0 228 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 FAM199XQ6PEV8 388 aaPredicted RBP21.09■□□□□ 0.97
LIME1-203ENST00000465591 BORAQ6PGQ7 559 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 BPHLQ86WA6 291 aaPredicted RBP21.09■□□□□ 0.97
LIME1-203ENST00000465591 TRAPPC9Q96Q05 1148 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 OSBPL9Q96SU4 736 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 KCND1Q9NSA2 647 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 TRMT1Q9NXH9 659 aaKnown RBP21.09■□□□□ 0.97
LIME1-203ENST00000465591 PADI1Q9ULC6 663 aa21.09■□□□□ 0.97
LIME1-203ENST00000465591 C2orf74A8MZ97 194 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 AP3B1O00203 1094 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 ZNF185O15231 689 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 UGT2B7P16662 529 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 AOAHP28039 575 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 PEBP1P30086 187 aaKnown RBP21.08■□□□□ 0.97
LIME1-203ENST00000465591 PPARGP37231 505 aaPredicted RBP21.08■□□□□ 0.97
LIME1-203ENST00000465591 TTPAP49638 278 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 PLOD1Q02809 727 aaPredicted RBP21.08■□□□□ 0.97
LIME1-203ENST00000465591 DNASE1L3Q13609 305 aa21.08■□□□□ 0.97
LIME1-203ENST00000465591 TMTC4Q5T4D3 741 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms