RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 RAB28P51157 221 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 THOP1P52888 689 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 LIMK1P53667 647 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 ERVFC1-1P60608 527 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 MFAP5Q13361 173 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 PTPRCAPQ14761 206 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 KIR2DS3Q14952 304 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 DUOXA1Q1HG43 343 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 HYAL4Q2M3T9 481 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 SPECC1Q5M775 1068 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 C9orf50Q5SZB4 431 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 ARMC3Q5W041 872 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 WBP2NLQ6ICG8 309 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 KCTD8Q6ZWB6 473 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 TMPRSS11FQ6ZWK6 438 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 CHST3Q7LGC8 479 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 CCDC186Q7Z3E2 898 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 GPALPP1Q8IXQ4 340 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 CRYBG2Q8N1P7 616 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 ATL1Q8WXF7 558 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 SLAMF9Q96A28 289 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 FER1L6-AS2Q96M78 137 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 MUS81Q96NY9 551 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 NAA11Q9BSU3 229 aaPredicted RBP3.19□□□□□ -1.9
RFC4-211ENST00000460408 SLC25A23Q9BV35 468 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 EDEM3Q9BZQ6 932 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 VN1R1Q9GZP7 353 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 APOBEC3GQ9HC16 384 aaKnown RBP3.19□□□□□ -1.9
RFC4-211ENST00000460408 Q9N2K0 584 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 GAPVD1Q14C86 1478 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 DCAF1Q9Y4B6 1507 aa3.19□□□□□ -1.9
RFC4-211ENST00000460408 IFT140Q96RY7 1462 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 IGLV5-45A0A087WSX0 123 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 MED19A0JLT2 244 aaPredicted RBP3.18□□□□□ -1.9
RFC4-211ENST00000460408 DENND3A2RUS2 1198 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 CCDC188H7C350 402 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 IPO8O15397 1037 aaKnown RBP3.18□□□□□ -1.9
RFC4-211ENST00000460408 SYNCRIPO60506 623 aaKnown RBP3.18□□□□□ -1.9
RFC4-211ENST00000460408 RAB40ALP0C0E4 278 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 GLULP15104 373 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 CKMT2P17540 419 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 ACHEP22303 614 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 PTAFRP25105 342 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 MPZP25189 248 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 MARK3P27448 753 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 PCGF2P35227 344 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 MTHFRP42898 656 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 PSMC4P43686 418 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 HOXA1P49639 335 aaPredicted RBP3.18□□□□□ -1.9
RFC4-211ENST00000460408 PRKCZQ05513 592 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 CAMK2DQ13557 499 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 PSMD6Q15008 389 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 GFI1BQ5VTD9 330 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 PRR27Q6MZM9 219 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 IL27RAQ6UWB1 636 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 SUSD1Q6UWL2 747 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 C9orf139Q6ZV77 190 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 NFE4Q86UQ8 179 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 EXOC3L1Q86VI1 746 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 FAM114A1Q8IWE2 563 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 TRIML1Q8N9V2 468 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 POC1AQ8NBT0 407 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 OR5M8Q8NGP6 311 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 RNF128Q8TEB7 428 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 DNASE2BQ8WZ79 361 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 MRPS27Q92552 414 aaKnown RBP3.18□□□□□ -1.9
RFC4-211ENST00000460408 SECISBP2LQ93073 1101 aaKnown RBP3.18□□□□□ -1.9
RFC4-211ENST00000460408 SCRN2Q96FV2 425 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 NUP85Q9BW27 656 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 FAM129AQ9BZQ8 928 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 OPA3Q9H6K4 179 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 PELI2Q9HAT8 420 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 MYNNQ9NPC7 610 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 TCF7L2Q9NQB0 619 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 ZNF701Q9NV72 531 aaPredicted RBP3.18□□□□□ -1.9
RFC4-211ENST00000460408 DPP3Q9NY33 737 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 LRWD1Q9UFC0 647 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 SLC24A2Q9UI40 661 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 ABT1Q9ULW3 272 aaKnown RBP3.18□□□□□ -1.9
RFC4-211ENST00000460408 LIPGQ9Y5X9 500 aa3.18□□□□□ -1.9
RFC4-211ENST00000460408 SYNJ1O43426 1573 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 FANCD2Q9BXW9 1451 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 KIF13AQ9H1H9 1805 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 HYKKA2RU49 373 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 IFITM10A6NMD0 228 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 C16orf97H3BN30 126 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 CAPN9O14815 690 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 PRKNO60260 465 aaPredicted RBP3.17□□□□□ -1.9
RFC4-211ENST00000460408 HSPA4LO95757 839 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 ATP5BP06576 529 aaKnown RBP3.17□□□□□ -1.9
RFC4-211ENST00000460408 F7P08709 466 aaPredicted RBP3.17□□□□□ -1.9
RFC4-211ENST00000460408 CCR10P46092 362 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 SLC9A3P48764 834 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 FMO5P49326 533 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 ZNF75DP51815 510 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 GAS1P54826 345 aa3.17□□□□□ -1.9
RFC4-211ENST00000460408 TPD52P55327 224 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms