RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 GNPTGQ9UJJ9 305 aa22.33■■□□□ 1.17
PTPN4-208ENST00000460289 POMT2Q9UKY4 750 aa22.33■■□□□ 1.17
PTPN4-208ENST00000460289 USP27XA6NNY8 438 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 C2orf74A8MZ97 194 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 BTN3A3O00478 584 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 KPNA5O15131 536 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 MAP3K7O43318 606 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 SPAG6O75602 509 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 ITGB2P05107 769 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 CDH3P22223 829 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 RPS3P23396 243 aaKnown RBP eCLIP22.32■■□□□ 1.16
PTPN4-208ENST00000460289 PRDX3P30048 256 aaKnown RBP22.32■■□□□ 1.16
PTPN4-208ENST00000460289 SHMT2P34897 504 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 TMED2Q15363 201 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 PPP1R7Q15435 360 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 DNAJC21Q5F1R6 531 aaKnown RBP22.32■■□□□ 1.16
PTPN4-208ENST00000460289 KIAA0930Q6ICG6 404 aaPredicted RBP22.32■■□□□ 1.16
PTPN4-208ENST00000460289 SLC22A15Q8IZD6 547 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 OR5AR1Q8NGP9 310 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 P2RY12Q9H244 342 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 GPN2Q9H9Y4 310 aaPredicted RBP22.32■■□□□ 1.16
PTPN4-208ENST00000460289 FGF21Q9NSA1 209 aa22.32■■□□□ 1.16
PTPN4-208ENST00000460289 IQCF5A8MTL0 148 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 BTN3A1O00481 513 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 GPC4O75487 556 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 KIAA0754O94854 1291 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 TMEM63AO94886 807 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 MT-ND3P03897 115 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 EBLN1P0CF75 366 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 WT1P19544 449 aaPredicted RBP22.31■■□□□ 1.16
PTPN4-208ENST00000460289 ARNTP27540 789 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 AOAHP28039 575 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 CSE1LP55060 971 aaKnown RBP22.31■■□□□ 1.16
PTPN4-208ENST00000460289 GNG11P61952 73 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 TUBB4BP68371 445 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 TUBB2AQ13885 445 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 KCNAB1Q14722 419 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 RNF187Q5TA31 235 aaPredicted RBP22.31■■□□□ 1.16
PTPN4-208ENST00000460289 PCSK4Q6UW60 755 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 ADGRF3Q8IZF5 1079 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 OR8K5Q8NH50 307 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 SERPINB12Q96P63 405 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 TUBB2BQ9BVA1 445 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 XKR8Q9H6D3 395 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 SOHLH2Q9NX45 425 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 BTRCQ9Y297 605 aa22.31■■□□□ 1.16
PTPN4-208ENST00000460289 TDRKHQ9Y2W6 561 aaKnown RBP22.31■■□□□ 1.16
PTPN4-208ENST00000460289 FAM237BA0A1B0GVD1 139 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 SLC9B1P1A6NJY1 282 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 GOLGA8MH3BSY2 632 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 RPN2P04844 631 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 CCNYL3P0C7X3 344 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 ZNF28P17035 718 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 PPIL6Q8IXY8 311 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 GSDMBQ8TAX9 411 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 STAMBPL1Q96FJ0 436 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 SLC45A3Q96JT2 553 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 SLC12A9Q9BXP2 914 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 SYTL2Q9HCH5 934 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 OR6C2Q9NZP2 312 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 LNPEPQ9UIQ6 1025 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 VPS9D1Q9Y2B5 631 aa22.3■■□□□ 1.16
PTPN4-208ENST00000460289 LOC101059948A0A1B0GTJ6 334 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 PIPSLA2A3N6 862 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 SLCO2B1O94956 709 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 STAT5AP42229 794 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 EIF3BP55884 814 aaKnown RBP22.29■■□□□ 1.16
PTPN4-208ENST00000460289 DHX34Q14147 1143 aaKnown RBP22.29■■□□□ 1.16
PTPN4-208ENST00000460289 TYSND1Q2T9J0 566 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 PAPD7Q5XG87 772 aaKnown RBP22.29■■□□□ 1.16
PTPN4-208ENST00000460289 NEPROQ6NW34 567 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 UNC5AQ6ZN44 842 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 HOOK3Q86VS8 718 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 KRT222Q8N1A0 295 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 NAT8LQ8N9F0 302 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 GALNT6Q8NCL4 622 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 LKAAEAR1Q8TD35 194 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 PITPNM3Q9BZ71 974 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 FANCEQ9HB96 536 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 KCND1Q9NSA2 647 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 ACTR10Q9NZ32 417 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 PCYOX1Q9UHG3 505 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 PADI1Q9ULC6 663 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 ICKQ9UPZ9 632 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 CDYLQ9Y232 598 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 RPS6KL1Q9Y6S9 549 aa22.29■■□□□ 1.16
PTPN4-208ENST00000460289 ZNF891A8MT65 544 aaPredicted RBP22.28■■□□□ 1.16
PTPN4-208ENST00000460289 GOLGA8KD6RF30 607 aa22.28■■□□□ 1.16
PTPN4-208ENST00000460289 H3BMM5 538 aa22.28■■□□□ 1.16
PTPN4-208ENST00000460289 GOLGA8TH3BQL2 631 aa22.28■■□□□ 1.16
PTPN4-208ENST00000460289 OGNP20774 298 aaKnown RBP22.28■■□□□ 1.16
PTPN4-208ENST00000460289 ADARP55265 1226 aaKnown RBP22.28■■□□□ 1.16
PTPN4-208ENST00000460289 ANKRD20A4Q4UJ75 823 aa22.28■■□□□ 1.16
PTPN4-208ENST00000460289 PWWP2BQ6NUJ5 590 aa22.28■■□□□ 1.16
PTPN4-208ENST00000460289 FBXO38Q6PIJ6 1188 aa22.28■■□□□ 1.16
PTPN4-208ENST00000460289 UNC5DQ6UXZ4 953 aa22.28■■□□□ 1.16
PTPN4-208ENST00000460289 OTOAQ7RTW8 1153 aa22.28■■□□□ 1.16
PTPN4-208ENST00000460289 PCGF5Q86SE9 256 aa22.28■■□□□ 1.16
PTPN4-208ENST00000460289 TMEM135Q86UB9 458 aa22.28■■□□□ 1.16
PTPN4-208ENST00000460289 VRK3Q8IV63 474 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms