RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CTBP1Q13363 440 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 LDB1Q86U70 411 aaPredicted RBP10.41□□□□□ -0.74
UBR4-208ENST00000459947 AMIGO1Q86WK6 493 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 NOA1Q8NC60 698 aaKnown RBP10.41□□□□□ -0.74
UBR4-208ENST00000459947 HMGCLL1Q8TB92 370 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 NCSTNQ92542 709 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 FAM8A1Q9UBU6 413 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 CEP250Q9BV73 2442 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 OR52A4PA6NMU1 304 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 PLD2O14939 933 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 TP73O15350 636 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 PREPP48147 710 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 RAB28P51157 221 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 ACY1Q03154 408 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 LGSNQ5TDP6 509 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 C3orf62Q6ZUJ4 267 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 RAB11FIP2Q7L804 512 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 DENND6AQ8IWF6 608 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 CCDC74BQ96LY2 380 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 DDA1Q9BW61 102 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 ASPSCR1Q9BZE9 553 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 FAM117AQ9C073 453 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 ANKMY1Q9P2S6 941 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 NOVA2Q9UNW9 492 aaKnown RBP10.41□□□□□ -0.74
UBR4-208ENST00000459947 PTPRBP23467 1997 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 SLU7O95391 586 aaKnown RBP10.41□□□□□ -0.74
UBR4-208ENST00000459947 MYF5P13349 255 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 SLC7A5Q01650 507 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 SLC5A12Q1EHB4 618 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 STRA8Q7Z7C7 330 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 IGDCC3Q8IVU1 814 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 GPATCH11Q8N954 259 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 OR2L8Q8NGY9 312 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 SKA2Q8WVK7 121 aaPredicted RBP10.41□□□□□ -0.74
UBR4-208ENST00000459947 PDLIM5Q96HC4 596 aaKnown RBP10.41□□□□□ -0.74
UBR4-208ENST00000459947 C9orf72Q96LT7 481 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 CCDC77Q9BR77 488 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 PCBD2Q9H0N5 130 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 ZNF768Q9H5H4 540 aaKnown RBP10.41□□□□□ -0.74
UBR4-208ENST00000459947 C1GALT1Q9NS00 363 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 RABGEF1Q9UJ41 708 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 VWA7Q9Y334 891 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 LOXL2Q9Y4K0 774 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 PCDHGA3Q9Y5H0 932 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 IKBKGQ9Y6K9 419 aa10.41□□□□□ -0.74
UBR4-208ENST00000459947 GOLGA8KD6RF30 607 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 GOLGA8TH3BQL2 631 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 NIPSNAP2O75323 286 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 ITGA2BP08514 1039 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 FDXRP22570 491 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 PKLRP30613 574 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 IL2P60568 153 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 MPP1Q00013 466 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 ANKS6Q68DC2 871 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 UNQ6494/PRO21346Q6UXR6 183 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 CEACAM20Q6UY09 585 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 KRT222Q8N1A0 295 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 KNL1Q8NG31 2342 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 ATL1Q8WXF7 558 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 IFT81Q8WYA0 676 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 GATA6Q92908 595 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 TAAR9Q96RI9 348 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 TBC1D10AQ9BXI6 508 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 PIKFYVEQ9Y2I7 2098 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 A0A087WUV0 522 aaPredicted RBP10.4□□□□□ -0.74
UBR4-208ENST00000459947 IGHV5-10-1A0A0J9YXX1 117 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 ZBTB14O43829 449 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 ITGB6P18564 788 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 CLCN7P51798 805 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 GABREP78334 506 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 HECTD2Q5U5R9 776 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 CLEC14AQ86T13 490 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 OR52E1Q8NGJ3 308 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 MCOLN3Q8TDD5 553 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 GPR21Q99679 349 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 HGH1Q9BTY7 390 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 HRASLS2Q9NWW9 162 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 POMT2Q9UKY4 750 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 AK5Q9Y6K8 562 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 RASGRF2O14827 1237 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 HAUS5O94927 633 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 MATN4O95460 622 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 HRH2P25021 359 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 SLC26A3P40879 764 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 AP1S2P56377 157 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 CAMK2BQ13554 666 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 CNSTQ6PJW8 725 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 ARHGAP22Q7Z5H3 698 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 KLHL6Q8WZ60 621 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 ELMO2Q96JJ3 720 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 ACSL6Q9UKU0 697 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 CDYLQ9Y232 598 aa10.4□□□□□ -0.74
UBR4-208ENST00000459947 FAM95CA0A1B0GW59 222 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 TCRBV9S1A1TA0A576 114 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 PSIP1O75475 530 aaKnown RBP10.39□□□□□ -0.75
UBR4-208ENST00000459947 BANF1O75531 89 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 CCND1P24385 295 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 CACHD1Q5VU97 1274 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 IRGCQ6NXR0 463 aa10.39□□□□□ -0.75
UBR4-208ENST00000459947 ZC3HC1Q86WB0 502 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms