RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 NKX2-8O15522 239 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 SUV39H1O43463 412 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 KLK3P07288 261 aaPredicted RBP9.71□□□□□ -0.86
HDLBP-228ENST00000459788 APRTP07741 180 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 FAM87AP0C7U9 286 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 EBLN1P0CF75 366 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 TPSB2P20231 275 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 RPS3P23396 243 aaKnown RBP eCLIP9.71□□□□□ -0.86
HDLBP-228ENST00000459788 MAGEA6P43360 314 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 PPP1CAP62136 330 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 RPS15P62841 145 aaKnown RBP9.71□□□□□ -0.86
HDLBP-228ENST00000459788 CYP4F2P78329 520 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 PRAMEP78395 509 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 SARNPP82979 210 aaKnown RBP9.71□□□□□ -0.86
HDLBP-228ENST00000459788 TPSAB1Q15661 275 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 FASTKD1Q53R41 847 aaKnown RBP9.71□□□□□ -0.86
HDLBP-228ENST00000459788 DUS1LQ6P1R4 473 aaKnown RBP9.71□□□□□ -0.86
HDLBP-228ENST00000459788 UNC5DQ6UXZ4 953 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 SYVN1Q86TM6 617 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 SLC22A15Q8IZD6 547 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 ADGRF3Q8IZF5 1079 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 LILRA3Q8N6C8 439 aaPredicted RBP9.71□□□□□ -0.86
HDLBP-228ENST00000459788 PHC3Q8NDX5 983 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 OR52E1Q8NGJ3 308 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 C1orf54Q8WWF1 131 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 ELMO1Q92556 727 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 HDAC10Q969S8 669 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 TCTN2Q96GX1 697 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 PANX3Q96QZ0 392 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 TCF12Q99081 682 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 NAP1L3Q99457 506 aaPredicted RBP9.71□□□□□ -0.86
HDLBP-228ENST00000459788 TLR10Q9BXR5 811 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 SOHLH2Q9NX45 425 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 BFARQ9NZS9 450 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 SERTAD3Q9UJW9 196 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 TTC7AQ9ULT0 858 aaPredicted RBP9.71□□□□□ -0.86
HDLBP-228ENST00000459788 AP1M2Q9Y6Q5 423 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 PTPN13Q12923 2485 aa9.71□□□□□ -0.86
HDLBP-228ENST00000459788 PIPSLA2A3N6 862 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 BTN3A1O00481 513 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 CCL22O00626 93 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 PRMT5O14744 637 aaPredicted RBP9.7□□□□□ -0.86
HDLBP-228ENST00000459788 SLC28A2O43868 658 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 GPC4O75487 556 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 SCRG1O75711 98 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 GOT2P00505 430 aaKnown RBP9.7□□□□□ -0.86
HDLBP-228ENST00000459788 FGGP02679 453 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 APOA4P06727 396 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 POLR2CP19387 275 aaPredicted RBP9.7□□□□□ -0.86
HDLBP-228ENST00000459788 PTPN4P29074 926 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 OAS2P29728 719 aaKnown RBP9.7□□□□□ -0.86
HDLBP-228ENST00000459788 PDHA2P29803 388 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 RPL22P35268 128 aaKnown RBP9.7□□□□□ -0.86
HDLBP-228ENST00000459788 PREPP48147 710 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 CSRP3P50461 194 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 ADARP55265 1226 aaKnown RBP9.7□□□□□ -0.86
HDLBP-228ENST00000459788 NFATC3Q12968 1075 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 KIR2DS3Q14952 304 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 UGT8Q16880 541 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 SLC5A12Q1EHB4 618 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 SYTL3Q4VX76 610 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 RNF187Q5TA31 235 aaPredicted RBP9.7□□□□□ -0.86
HDLBP-228ENST00000459788 TCTN3Q6NUS6 607 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 SPESP1Q6UW49 350 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 ZNF534Q76KX8 674 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 HOOK3Q86VS8 718 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 HPS6Q86YV9 775 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 TMEM126BQ8IUX1 230 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 OR6P1Q8NGX9 317 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 C9orf43Q8TAL5 461 aaPredicted RBP9.7□□□□□ -0.86
HDLBP-228ENST00000459788 DENND1AQ8TEH3 1009 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 CT55Q8WUE5 264 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 SLC22A18Q96BI1 424 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 TRAPPC9Q96Q05 1148 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 DHRS4Q9BTZ2 278 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 KIFC1Q9BW19 673 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 RAB11FIP5Q9BXF6 653 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 AP1M1Q9BXS5 423 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 ENAMQ9NRM1 1142 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 TREX1Q9NSU2 369 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 CATSPERZQ9NTU4 200 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 ASF1AQ9Y294 204 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 VPS9D1Q9Y2B5 631 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 PCDHGB7Q9Y5F8 929 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 KCNMB2Q9Y691 235 aa9.7□□□□□ -0.86
HDLBP-228ENST00000459788 PRRC2CQ9Y520 2896 aaKnown RBP9.7□□□□□ -0.86
HDLBP-228ENST00000459788 MAGEB16A2A368 324 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 CCDC78A2IDD5 438 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 GSAPA4D1B5 854 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 SLC9B1P1A6NJY1 282 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
HDLBP-228ENST00000459788 H3BMM5 538 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 MKRN2OSH3BPM6 223 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 BTN3A3O00478 584 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 CD3EAPO15446 510 aaKnown RBP9.69□□□□□ -0.86
HDLBP-228ENST00000459788 RFPL1O75677 317 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 SLCO2B1O94956 709 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 WISP1O95388 367 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 TIAF1O95411 115 aa9.69□□□□□ -0.86
HDLBP-228ENST00000459788 MLNP12872 115 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms