RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 PHF2O75151 1096 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 NDUFS3O75489 264 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 C1QL1O75973 258 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 VAPBO95292 243 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 MT-ND3P03897 115 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 APOA4P06727 396 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 CCNYL3P0C7X3 344 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 MLNP12872 115 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 ITGB6P18564 788 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 CDH3P22223 829 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 PRDX3P30048 256 aaKnown RBP15.64■□□□□ 0.09
COL7A1-203ENST00000459756 CCR7P32248 378 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 SHMT2P34897 504 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 CYP4F2P78329 520 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 LY6DQ14210 128 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 KCTD19Q17RG1 926 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-203ENST00000459756 DNAJC21Q5F1R6 531 aaKnown RBP15.64■□□□□ 0.09
COL7A1-203ENST00000459756 MRNIPQ6NTE8 343 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 NAPRTQ6XQN6 538 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 SDCCAG8Q86SQ7 713 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-203ENST00000459756 SLC22A15Q8IZD6 547 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 UNC5BQ8IZJ1 945 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 C17orf53Q8N3J3 647 aaPredicted RBP15.64■□□□□ 0.09
COL7A1-203ENST00000459756 GALNT6Q8NCL4 622 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 MCUQ8NE86 351 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 OR8K5Q8NH50 307 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 OR5K2Q8NHB8 316 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 GRK7Q8WTQ7 553 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 CPT1BQ92523 772 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 EXTL1Q92935 676 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 MFSD3Q96ES6 412 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 MED8Q96G25 268 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 PITPNM3Q9BZ71 974 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 XAB2Q9HCS7 855 aaKnown RBP15.64■□□□□ 0.09
COL7A1-203ENST00000459756 SOHLH2Q9NX45 425 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 NEU2Q9Y3R4 380 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 RPS6KL1Q9Y6S9 549 aa15.64■□□□□ 0.09
COL7A1-203ENST00000459756 SLC9B1P1A6NJY1 282 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 PFDN6O15212 129 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 MAP3K7O43318 606 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 AVILO75366 819 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 GPC4O75487 556 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 PAMP19021 973 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 RPS3P23396 243 aaKnown RBP eCLIP15.63■□□□□ 0.09
COL7A1-203ENST00000459756 ARNTP27540 789 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 AOAHP28039 575 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 FNTAP49354 379 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 TERF1P54274 439 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 MC1RQ01726 317 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 HSPA14Q0VDF9 509 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 COL9A2Q14055 689 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-203ENST00000459756 TMED2Q15363 201 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 TBR1Q16650 682 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 LINC00303Q3SY05 128 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 RNF187Q5TA31 235 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-203ENST00000459756 ANKRD22Q5VYY1 191 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 PTRHD1Q6GMV3 140 aaKnown RBP15.63■□□□□ 0.09
COL7A1-203ENST00000459756 KIAA0930Q6ICG6 404 aaPredicted RBP15.63■□□□□ 0.09
COL7A1-203ENST00000459756 PWWP2BQ6NUJ5 590 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 CASC4Q6P4E1 433 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 CAND1Q86VP6 1230 aaKnown RBP15.63■□□□□ 0.09
COL7A1-203ENST00000459756 ADGRF3Q8IZF5 1079 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 ZNF843Q8N446 348 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 OTUD6BQ8N6M0 293 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 PPM1MQ96MI6 270 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 PANX3Q96QZ0 392 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 TCF12Q99081 682 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 ARHGAP9Q9BRR9 750 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 P2RY12Q9H244 342 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 XKR8Q9H6D3 395 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 SYTL2Q9HCH5 934 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 ACTR10Q9NZ32 417 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 OR6C2Q9NZP2 312 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 SAMD15Q9P1V8 674 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 GNPTGQ9UJJ9 305 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 PADI1Q9ULC6 663 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 ICKQ9UPZ9 632 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 CDYLQ9Y232 598 aa15.63■□□□□ 0.09
COL7A1-203ENST00000459756 BOD1L1Q8NFC6 3051 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 MAGEB16A2A368 324 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 SDR42E2A6NKP2 422 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 IQCF5A8MTL0 148 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 KPNA5O15131 536 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 TMEM63AO94886 807 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 SLCO2B1O94956 709 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 TIAF1O95411 115 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 RPN2P04844 631 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 MSL3P1P0C860 447 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 TCP1P17987 556 aaKnown RBP15.62■□□□□ 0.09
COL7A1-203ENST00000459756 CSE1LP55060 971 aaKnown RBP15.62■□□□□ 0.09
COL7A1-203ENST00000459756 GPR19Q15760 415 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 CRTC2Q53ET0 693 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-203ENST00000459756 FBXO38Q6PIJ6 1188 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 CES3Q6UWW8 571 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 UNC5AQ6ZN44 842 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 LKAAEAR1Q8TD35 194 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 ZNF501Q96CX3 271 aaPredicted RBP15.62■□□□□ 0.09
COL7A1-203ENST00000459756 CATSPER2Q96P56 530 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 NRTNQ99748 197 aa15.62■□□□□ 0.09
COL7A1-203ENST00000459756 FANCEQ9HB96 536 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms