RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SLC24A2Q9UI40 661 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 ATXN7L1Q9ULK2 861 aaPredicted RBP9.8□□□□□ -0.84
ATG4A-206ENST00000457035 DHRS7Q9Y394 339 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 NEUROG3Q9Y4Z2 214 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 HEBP2Q9Y5Z4 205 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 COLEC10Q9Y6Z7 277 aa9.8□□□□□ -0.84
ATG4A-206ENST00000457035 APC2O95996 2303 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 FAM149AA5PLN7 773 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 TMEM8BA6NDV4 472 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 SRRM3A6NNA2 597 aaPredicted RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 SPAG6O75602 509 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 SLU7O95391 586 aaKnown RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 CPNE6O95741 557 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 FAM153BP0C7A2 387 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 TPBGLP0DKB5 382 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 NDUFS1P28331 727 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 ABCG1P45844 678 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 PDX1P52945 283 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 TUBB4BP68371 445 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 ZFP36L1Q07352 338 aaKnown RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 ABRQ12979 859 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 TARDBPQ13148 414 aaKnown RBP eCLIP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 SPIDRQ14159 915 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 CLPPQ16740 277 aaPredicted RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 ISXQ2M1V0 245 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 KBTBD12Q3ZCT8 623 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 FAM153CQ494X1 144 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 SYTL3Q4VX76 610 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 ACSBG2Q5FVE4 666 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 RBM20Q5T481 1227 aaKnown RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 CYHR1Q6ZMK1 362 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 CCNI2Q6ZMN8 369 aaPredicted RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 RBM44Q6ZP01 1051 aaKnown RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 STRA8Q7Z7C7 330 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 PIM3Q86V86 326 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 ZBTB2Q8N680 514 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 EIF1ADQ8N9N8 165 aaKnown RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 SIDT2Q8NBJ9 832 aaKnown RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 ACVR1CQ8NER5 493 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 GIMAP7Q8NHV1 300 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 FBF1Q8TES7 1133 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 INPP5DQ92835 1189 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 NDNQ99608 321 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 GPR21Q99679 349 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 NUDT22Q9BRQ3 303 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 FUT8Q9BYC5 575 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 TXLNGYQ9BZA5 131 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 CDC42EP4Q9H3Q1 356 aaKnown RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 KIR3DX1Q9H7L2 352 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 MVB12BQ9H7P6 319 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 ANKZF1Q9H8Y5 726 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 RDH14Q9HBH5 336 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 PDP2Q9P2J9 529 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 CORO1CQ9ULV4 474 aaPredicted RBP9.79□□□□□ -0.84
ATG4A-206ENST00000457035 CLCA2Q9UQC9 943 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 VWA7Q9Y334 891 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 PCDHB3Q9Y5E6 796 aa9.79□□□□□ -0.84
ATG4A-206ENST00000457035 D6RAR5 112 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 E5RI56 91 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 UBXN7O94888 489 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 MATN4O95460 622 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 MYBL2P10244 700 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 TYRP1P17643 537 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 ATP5DP30049 168 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 CSF2RBP32927 897 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 SKIV2L2P42285 1042 aaKnown RBP9.78□□□□□ -0.84
ATG4A-206ENST00000457035 CDKN2DP55273 166 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 PRKG2Q13237 762 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 TMED2Q15363 201 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 KLHL38Q2WGJ6 581 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 HECTD2Q5U5R9 776 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 TMEM71Q6P5X7 295 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 WDR74Q6RFH5 385 aaPredicted RBP9.78□□□□□ -0.84
ATG4A-206ENST00000457035 B3GNT8Q7Z7M8 397 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 SLITRK4Q8IW52 837 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 TBC1D21Q8IYX1 336 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 OR5AR1Q8NGP9 310 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 OR10G6Q8NH81 332 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 OR5K2Q8NHB8 316 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 CD200R1Q8TD46 325 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 JPH3Q8WXH2 748 aaPredicted RBP9.78□□□□□ -0.84
ATG4A-206ENST00000457035 NCSTNQ92542 709 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 CDKL2Q92772 493 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 AHCYL2Q96HN2 611 aaKnown RBP9.78□□□□□ -0.84
ATG4A-206ENST00000457035 NRTNQ99748 197 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 CPNE1Q99829 537 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 SEMA6CQ9H3T2 930 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 RHOJQ9H4E5 214 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 EPB41L1Q9H4G0 881 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 TFB2MQ9H5Q4 396 aaKnown RBP9.78□□□□□ -0.84
ATG4A-206ENST00000457035 NSMCE4AQ9NXX6 385 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 TAS2R13Q9NYV9 303 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 ASF1AQ9Y294 204 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 MSRB2Q9Y3D2 182 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 ENTPD2Q9Y5L3 495 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 NFS1Q9Y697 457 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 IGF2RP11717 2491 aa9.78□□□□□ -0.84
ATG4A-206ENST00000457035 MDC1Q14676 2089 aaKnown RBP9.78□□□□□ -0.84
ATG4A-206ENST00000457035 CHD6Q8TD26 2715 aa9.77□□□□□ -0.84
ATG4A-206ENST00000457035 IGHV5-10-1A0A0J9YXX1 117 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms