RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 KCNN3Q9UGI6 736 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 PCDHGB2Q9Y5G2 931 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 MAU2Q9Y6X3 613 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 BCL9LQ86UU0 1499 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 SH3D21A4FU49 640 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 CLDN24A6NM45 220 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 SOCS2O14508 198 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 STX16O14662 325 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 DCLK1O15075 740 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 TLL1O43897 1013 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ATE1O95260 518 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 NDST3O95803 873 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 TSPAN8P19075 237 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 VARSP26640 1264 aaKnown RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ELK4P28324 431 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 AGTR1P30556 359 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 NTSP30990 170 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 NR4A2P43354 598 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 TSPAN5P62079 268 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 SLC13A2Q13183 592 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF234Q14588 700 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 OXA1LQ15070 435 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 CDK10Q15131 360 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 FAM98CQ17RN3 349 aaKnown RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 AKIRIN2Q53H80 203 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 PITRM1Q5JRX3 1037 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 C10orf120Q5SQS8 335 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 STEAP4Q687X5 459 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 DESI1Q6ICB0 168 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 TRIM48Q8IWZ4 208 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 KLHL36Q8N4N3 616 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 PCDH19Q8TAB3 1148 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 STOML3Q8TAV4 291 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 SLC2A14Q8TDB8 520 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 NR4A3Q92570 626 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 DCPSQ96C86 337 aaKnown RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 LINGO1Q96FE5 620 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 TMEM80Q96HE8 168 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 RIPOR3Q96MK2 946 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 C8orf37Q96NL8 207 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 PELOQ9BRX2 385 aaKnown RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ZCCHC2Q9C0B9 1178 aaKnown RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 FN3KQ9H479 309 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 POPDC3Q9HBV1 291 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 MRM3Q9HC36 420 aaKnown RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 B3GNT2Q9NY97 397 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF282Q9UDV7 671 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 PTCH2Q9Y6C5 1203 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 PLIN4Q96Q06 1357 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 A8MT66 165 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 CILPO75339 1184 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 GADD45GO95257 159 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 WDPCPO95876 746 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 EGFRP00533 1210 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 HMGN1P05114 100 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 RHOCP08134 193 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 RYKP34925 604 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 TBX4P57082 545 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 MRPS5P82675 430 aaKnown RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 CNTN2Q02246 1040 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 MXD1Q05195 221 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ARHGAP15Q53QZ3 475 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 TSTD2Q5T7W7 516 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 RETSATQ6NUM9 610 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 IDO2Q6ZQW0 420 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 PGAP1Q75T13 922 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 OAFQ86UD1 273 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 TSPAN33Q86UF1 283 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 OR5B17Q8NGF7 314 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 OR13F1Q8NGS4 319 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 POF1BQ8WVV4 589 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ASB15Q8WXK1 588 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 SNAPC3Q92966 411 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ACDQ96AP0 544 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 CEP295NLQ96MC4 621 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ACO2Q99798 780 aaKnown RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 PSD2Q9BQI7 771 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF395Q9H8N7 513 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 KLF15Q9UIH9 416 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF490Q9ULM2 529 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 MEMO1Q9Y316 297 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 EXOSC1Q9Y3B2 195 aaKnown RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 UGT2A1Q9Y4X1 527 aa4.92□□□□□ -1.62
PCDH9-203ENST00000456367 SPIN1Q9Y657 262 aaPredicted RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 SETD1BQ9UPS6 1966 aaKnown RBP4.92□□□□□ -1.62
PCDH9-203ENST00000456367 MYOCOSA0A1B0GUC4 107 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 TCRBV7S3A2A0A539 114 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 OR2AT4A6NND4 320 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 MAGEB17A8MXT2 336 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 DISC1C4P0D8 188 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 MSI1O43347 362 aaKnown RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CHP2O43745 196 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CREG1O75629 220 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 CDRT1O95170 752 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 TYMPP19971 482 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 PVALBP20472 110 aaPredicted RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 ACADLP28330 430 aa4.91□□□□□ -1.62
PCDH9-203ENST00000456367 GTF2E2P29084 291 aaKnown RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 GDI2P50395 445 aaKnown RBP4.91□□□□□ -1.62
PCDH9-203ENST00000456367 RPS14P62263 151 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms