RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ABCD2Q9UBJ2 740 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 PDE10AQ9Y233 779 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 PLEKHM1Q9Y4G2 1056 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 AKAP9Q99996 3911 aa4.84□□□□□ -1.64
RIF1-207ENST00000454583 RALGAPA1Q6GYQ0 2036 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FAM221BA6H8Z2 402 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 KLHL33A6NCF5 533 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 POC1B-GALNT4F8VUJ3 575 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 F8W8V4 182 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 KCNJ13O60928 360 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ATP5HO75947 161 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CSPG5O95196 566 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 SERPINE1P05121 402 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 EPHX1P07099 455 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CYP2A6P11509 494 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 IMPA1P29218 277 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 OXTRP30559 389 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 TTPAP49638 278 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ATP4BP51164 291 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ABCE1P61221 599 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 CCNIQ14094 377 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 PRPSAP1Q14558 356 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 SLC9B1Q4ZJI4 515 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FASTKD1Q53R41 847 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 METTL21CQ5VZV1 264 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ZNF470Q6ECI4 717 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 TTC23LQ6PF05 361 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 KBTBD2Q8IY47 623 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 SHISA5Q8N114 240 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 NAGSQ8N159 534 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FAM160A2Q8N612 972 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 OR2T11Q8NH01 316 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 OR5K2Q8NHB8 316 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ACTRT2Q8TDY3 377 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 NAT14Q8WUY8 206 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FOXJ1Q92949 421 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 NXNL1Q96CM4 212 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 MOCOSQ96EN8 888 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CFAP36Q96G28 342 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 PDXPQ96GD0 296 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 LRRC61Q9BV99 259 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 TSSK1BQ9BXA7 367 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 VPS37BQ9H9H4 285 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 BPIFA1Q9NP55 256 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 DNAAF2Q9NVR5 837 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 SEPT10Q9P0V9 454 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 APPL1Q9UKG1 709 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 VWA7Q9Y334 891 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FAM170BA6NMN3 283 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ARHGEF33A8MVX0 844 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 NTN3O00634 580 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 PPP6CO00743 305 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FBP2O00757 339 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 SDHDO14521 159 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CASC3O15234 703 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 DCXO43602 365 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 H2AFYO75367 372 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 LYPLA1O75608 230 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 ZNF883P0CG24 379 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 PKMP14618 531 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 FASLGP48023 281 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 LSSP48449 732 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 POLR2LP62875 67 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 TMEM115Q12893 351 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 LRP8Q14114 963 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 TBCCQ15814 346 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FNDC3BQ53EP0 1204 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 ZNF385CQ66K41 422 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 CPZQ66K79 652 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ZNF517Q6ZMY9 492 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 TRIM46Q7Z4K8 759 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 MTDHQ86UE4 582 aaKnown RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 LONP2Q86WA8 852 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 C1orf210Q8IVY1 113 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 RIMKLAQ8IXN7 391 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ADGRF3Q8IZF5 1079 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CACTIN-AS1Q8N1I8 211 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ZNF781Q8N8C0 355 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CREB3L4Q8TEY5 395 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FBXL8Q96CD0 374 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 SELENOSQ9BQE4 189 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CCDC77Q9BR77 488 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 BTBD10Q9BSF8 475 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CHST8Q9H2A9 424 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 COG4Q9H9E3 785 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 TMEM45AQ9NWC5 275 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 BFARQ9NZS9 450 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ZDHHC2Q9UIJ5 367 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 ZNF490Q9ULM2 529 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 ICKQ9UPZ9 632 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 MN1Q10571 1320 aaPredicted RBP4.83□□□□□ -1.64
RIF1-207ENST00000454583 TRBV5-3A0A0A0MS03 114 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 A0A1W2PQ72 361 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 TLDC2A0PJX2 215 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 PRSS38A1L453 326 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 FITM1A5D6W6 292 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 TMEM229AB2RXF0 380 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 SCELO95171 688 aa4.83□□□□□ -1.64
RIF1-207ENST00000454583 CBX6O95503 412 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms