RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 TDRKHQ9Y2W6 561 aaKnown RBP12□□□□□ -0.49
USP1-203ENST00000442679 VWA7Q9Y334 891 aa12□□□□□ -0.49
USP1-203ENST00000442679 GOLGA4Q13439 2230 aaKnown RBP12□□□□□ -0.49
USP1-203ENST00000442679 NCOR2Q9Y618 2525 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 OR6C74A6NCV1 312 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 TRABD2BA6NFA1 517 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 CAPN5O15484 640 aaPredicted RBP11.99□□□□□ -0.49
USP1-203ENST00000442679 RPN2P04844 631 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 MCM3P25205 808 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 CCKBRP32239 447 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 PHBP35232 272 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 CAPZBP47756 277 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 CDKN2DP55273 166 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 KLHL38Q2WGJ6 581 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 KBTBD12Q3ZCT8 623 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 SNAP47Q5SQN1 464 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 HECTD2Q5U5R9 776 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 TTC23LQ6PF05 361 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 ZC3HC1Q86WB0 502 aaKnown RBP11.99□□□□□ -0.49
USP1-203ENST00000442679 SPNS2Q8IVW8 549 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 CTAGE3PQ8IX95 158 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 OR52E1Q8NGJ3 308 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 GIMAP7Q8NHV1 300 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 CD200R1Q8TD46 325 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 RSC1A1Q92681 617 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 ZDHHC12Q96GR4 267 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 ELMO2Q96JJ3 720 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 CCDC74BQ96LY2 380 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 TGM7Q96PF1 710 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 CDC42EP4Q9H3Q1 356 aaKnown RBP11.99□□□□□ -0.49
USP1-203ENST00000442679 SRMSQ9H3Y6 488 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 XKR8Q9H6D3 395 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 HRASLS2Q9NWW9 162 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 PDP2Q9P2J9 529 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 TXNDC16Q9P2K2 825 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 KLHL3Q9UH77 587 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 ZFC3H1O60293 1989 aaKnown RBP11.99□□□□□ -0.49
USP1-203ENST00000442679 ASXL3Q9C0F0 2248 aa11.99□□□□□ -0.49
USP1-203ENST00000442679 CCDC187A0A096LP49 1063 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 OR5K3A6NET4 321 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 A8MU76 341 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 AGRPO00253 132 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 KDM1AO60341 852 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 SLU7O95391 586 aaKnown RBP11.98□□□□□ -0.49
USP1-203ENST00000442679 C1QAP02745 245 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 TPBGLP0DKB5 382 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 CBSLP0DN79 551 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 SAT1P21673 171 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 CD9P21926 228 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 CBSP35520 551 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 GFERP55789 205 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 TUBB4BP68371 445 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 ILF2Q12905 390 aaKnown RBP11.98□□□□□ -0.49
USP1-203ENST00000442679 TRA2AQ13595 282 aaKnown RBP eCLIP11.98□□□□□ -0.49
USP1-203ENST00000442679 SLMAPQ14BN4 828 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 FAM45BPQ6NSW5 357 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 ARMC6Q6NXE6 501 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 IRGCQ6NXR0 463 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 NEK10Q6ZWH5 1172 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 RAB11FIP2Q7L804 512 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 AMIGO1Q86WK6 493 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 OOSP2Q86WS3 158 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 CPNE9Q8IYJ1 553 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 PPM1NQ8N819 430 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 RCBTB1Q8NDN9 531 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 FAM45AQ8TCE6 357 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 LIN37Q96GY3 246 aaPredicted RBP11.98□□□□□ -0.49
USP1-203ENST00000442679 NRTNQ99748 197 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 CPNE1Q99829 537 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 MCMBPQ9BTE3 642 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 NRSN2Q9GZP1 204 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 RAB33BQ9H082 229 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 RHOJQ9H4E5 214 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 EPHA6Q9UF33 1036 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 RUVBL2Q9Y230 463 aaKnown RBP11.98□□□□□ -0.49
USP1-203ENST00000442679 NFS1Q9Y697 457 aa11.98□□□□□ -0.49
USP1-203ENST00000442679 MN1Q10571 1320 aaPredicted RBP11.97□□□□□ -0.49
USP1-203ENST00000442679 RP1P56715 2156 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 FAM95CA0A1B0GW59 222 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 EIF3FO00303 357 aaPredicted RBP11.97□□□□□ -0.49
USP1-203ENST00000442679 MATN4O95460 622 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 C1orf105O95561 183 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 ACSL3O95573 720 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 C9P02748 559 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 MPOP05164 745 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 FAM153BP0C7A2 387 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 MPC1LP0DKB6 136 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 THRAP10827 490 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 ENO3P13929 434 aaPredicted RBP11.97□□□□□ -0.49
USP1-203ENST00000442679 POLR2CP19387 275 aaPredicted RBP11.97□□□□□ -0.49
USP1-203ENST00000442679 FDXRP22570 491 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 SHMT2P34897 504 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 GP5P40197 560 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 CCNFP41002 786 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 RGS4P49798 205 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 PRKAA1Q13131 559 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 PDAP1Q13442 181 aaKnown RBP11.97□□□□□ -0.49
USP1-203ENST00000442679 NAB1Q13506 487 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 C16orf72Q14CZ0 275 aa11.97□□□□□ -0.49
USP1-203ENST00000442679 FAM153CQ494X1 144 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms