RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 TFB2MQ9H5Q4 396 aaKnown RBP19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 XKR8Q9H6D3 395 aa19.28■□□□□ 0.68
SHROOM1-204ENST00000440118 GOLGA6L3A6NEY3 463 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 J3QKU1 62 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 OAS2P29728 719 aaKnown RBP19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 SHMT2P34897 504 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 KCNJ1P48048 391 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 VPS41P49754 854 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 CRADDP78560 199 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 KCNAB2Q13303 367 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 DNASE1L3Q13609 305 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 ERV3-1Q14264 604 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 TMED2Q15363 201 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 ZNF658BQ4V348 819 aaPredicted RBP19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 ATP1A1-AS1Q5TC04 95 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 OR5AR1Q8NGP9 310 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 GSDMBQ8TAX9 411 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 CT55Q8WUE5 264 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 N4BP2L2Q92802 583 aaPredicted RBP19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 LHX9Q9NQ69 397 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 CHRAC1Q9NRG0 131 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 GEMIN8Q9NWZ8 242 aaKnown RBP19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 TTC7AQ9ULT0 858 aaPredicted RBP19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 BTRCQ9Y297 605 aa19.27■□□□□ 0.68
SHROOM1-204ENST00000440118 SPTBP11277 2137 aa19.27■□□□□ 0.67
SHROOM1-204ENST00000440118 BTN3A3O00478 584 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 APOA4P06727 396 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 CYP2A7P20853 494 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 PRDX3P30048 256 aaKnown RBP19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 TTPAP49638 278 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 ACVR1Q04771 509 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 PTRHD1Q6GMV3 140 aaKnown RBP19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 APOBEC4Q8WW27 367 aaKnown RBP19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 MR1Q95460 341 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 TWSG1Q9GZX9 223 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 KLHL25Q9H0H3 589 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 SLC25A18Q9H1K4 315 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 KCND1Q9NSA2 647 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 ACTR10Q9NZ32 417 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 POLG2Q9UHN1 485 aa19.26■□□□□ 0.67
SHROOM1-204ENST00000440118 PIPSLA2A3N6 862 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 CDC14CA4D256 554 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 C21orf140B9A014 251 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 TMEM150CB9EJG8 249 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 CD3EAPO15446 510 aaKnown RBP19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 RPN2P04844 631 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 KLK3P07288 261 aaPredicted RBP19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 F8A1P23610 371 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 RPS15P62841 145 aaKnown RBP19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 SARNPP82979 210 aaKnown RBP19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 HSPA14Q0VDF9 509 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 TRIP13Q15645 432 aaPredicted RBP19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 ZNF534Q76KX8 674 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 LDB1Q86U70 411 aaPredicted RBP19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 TBC1D21Q8IYX1 336 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 OR5K2Q8NHB8 316 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 CPT1BQ92523 772 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 CLIP3Q96DZ5 547 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 STARD5Q9NSY2 213 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 ICKQ9UPZ9 632 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 POLHQ9Y253 713 aa19.25■□□□□ 0.67
SHROOM1-204ENST00000440118 SNRNP200O75643 2136 aaKnown RBP19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 NDUFS3O75489 264 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 ST6GAL1P15907 406 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 MGAT1P26572 445 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 NPY2RP49146 381 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 NFKB2Q00653 900 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 GPS1Q13098 491 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 SEMA3AQ14563 771 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 CRTC2Q53ET0 693 aaPredicted RBP19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 DNAJC21Q5F1R6 531 aaKnown RBP19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 CASC4Q6P4E1 433 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 SPESP1Q6UW49 350 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 CFAP61Q8NHU2 1237 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 SKA2Q8WVK7 121 aaPredicted RBP19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 ASZ1Q8WWH4 475 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 ZNF501Q96CX3 271 aaPredicted RBP19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 NRTNQ99748 197 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 ACTL8Q9H568 366 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 SYTL2Q9HCH5 934 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 IRAK4Q9NWZ3 460 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 GNPTGQ9UJJ9 305 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 PLAGL1Q9UM63 463 aa19.24■□□□□ 0.67
SHROOM1-204ENST00000440118 SLC5A10A0PJK1 596 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 PRMT5O14744 637 aaPredicted RBP19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 PFDN6O15212 129 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 PVRP15151 417 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 TPSB2P20231 275 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 CDK16Q00536 496 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 TPSAB1Q15661 275 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 UNC5AQ6ZN44 842 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 ADGRF3Q8IZF5 1079 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 MPP5Q8N3R9 675 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 C9orf43Q8TAL5 461 aaPredicted RBP19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 SEC14L1Q92503 715 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 SGSM3Q96HU1 749 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 PANX3Q96QZ0 392 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 NAP1L3Q99457 506 aaPredicted RBP19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 PITPNM3Q9BZ71 974 aa19.23■□□□□ 0.67
SHROOM1-204ENST00000440118 LATS2Q9NRM7 1088 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms