RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 NCAM2O15394 837 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 CA12O43570 354 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 SCELO95171 688 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 CCNYL3P0C7X3 344 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 NFKB1P19838 968 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 CHMP24386 653 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 CLCN5P51795 746 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 UFM1P61960 85 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 SIM2Q14190 667 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-206ENST00000428313 DALRD3Q5D0E6 543 aaKnown RBP15.8■□□□□ 0.12
C9orf3-206ENST00000428313 LAMTOR1Q6IAA8 161 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 ZFAND4Q86XD8 727 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 CCDC117Q8IWD4 279 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-206ENST00000428313 KLHDC8BQ8IXV7 354 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 Q96MT0 163 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 ZNF583Q96ND8 569 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 VAT1Q99536 393 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 JPH1Q9HDC5 661 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-206ENST00000428313 ADGRE2Q9UHX3 823 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 KLK4Q9Y5K2 254 aa15.8■□□□□ 0.12
C9orf3-206ENST00000428313 DCLK1O15075 740 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 AKR7A2O43488 359 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 LINC00032P0C843 101 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 CYP2C8P10632 490 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 IL1RNP18510 177 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 POU3F3P20264 500 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-206ENST00000428313 CBX5P45973 191 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 FOXA1P55317 472 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 SMARCB1Q12824 385 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 STRIP1Q5VSL9 837 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 IER5Q5VY09 327 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 PLEKHM3Q6ZWE6 761 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 CYP4Z1Q86W10 505 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 KIF18BQ86Y91 864 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 CHPFQ8IZ52 775 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 HDHD5Q9BXW7 423 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 NIFKQ9BYG3 293 aaKnown RBP15.79■□□□□ 0.12
C9orf3-206ENST00000428313 SMURF1Q9HCE7 757 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 V9GYH0 126 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 THSD7AQ9UPZ6 1657 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 MIA3Q5JRA6 1907 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 ANKRD12Q6UB98 2062 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 H3BUI4 141 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 TOR1AO14656 332 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 SLC22A5O76082 557 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 PAPSS2O95340 614 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-206ENST00000428313 PAMP19021 973 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 CPN2P22792 545 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 SOX9P48436 509 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 MTPNP58546 118 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 RAB44Q7Z6P3 723 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-206ENST00000428313 FNDC5Q8NAU1 212 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 PPHLN1Q8NEY8 458 aaKnown RBP15.79■□□□□ 0.12
C9orf3-206ENST00000428313 OR2T12Q8NG77 320 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 SLC35F5Q8WV83 523 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 C1orf74Q96LT6 269 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 NT5C1AQ9BXI3 368 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 ERVMER34-1Q9H9K5 563 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 ATP6V1HQ9UI12 483 aa15.79■□□□□ 0.12
C9orf3-206ENST00000428313 A0A087WZ62 844 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.78■□□□□ 0.12
C9orf3-206ENST00000428313 A0A0B4J293 547 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 G3V3G9 751 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 MUSKO15146 869 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 IFNA16P05015 189 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 CAP2P40123 477 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 KYAT1Q16773 422 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 TMEM132AQ24JP5 1023 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 DCAF8Q5TAQ9 597 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 KDM4DQ6B0I6 523 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 GALNT5Q7Z7M9 940 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 MYDGFQ969H8 173 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 RNF31Q96EP0 1072 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 WDFY2Q96P53 400 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 MCCC1Q96RQ3 725 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-206ENST00000428313 COPS4Q9BT78 406 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 SRRQ9GZT4 340 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 OR51E2Q9H255 320 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 ALG9Q9H6U8 611 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 UTS2RQ9UKP6 389 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 BRCA1P38398 1863 aaKnown RBP15.78■□□□□ 0.12
C9orf3-206ENST00000428313 A0A1W2PQ09 198 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 SLC35F4A4IF30 521 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 I3L521 148 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 IFRD1O00458 451 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-206ENST00000428313 SEC14L5O43304 696 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 WBP4O75554 376 aaKnown RBP15.78■□□□□ 0.12
C9orf3-206ENST00000428313 WISP3O95389 354 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-206ENST00000428313 RETP07949 1114 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 HOXB1P14653 301 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-206ENST00000428313 PRKG2Q13237 762 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 PWP1Q13610 501 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 RIN1Q13671 783 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 GALEQ14376 348 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 BAK1Q16611 211 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 SUPT20HL1Q3ZLR7 823 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 KIAA0930Q6ICG6 404 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-206ENST00000428313 CDH24Q86UP0 819 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 RNF130Q86XS8 419 aa15.78■□□□□ 0.12
C9orf3-206ENST00000428313 ZNF548Q8NEK5 533 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms