RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 TLL2Q9Y6L7 1015 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 UNCXA6NJT0 531 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 QSOX1O00391 747 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 GADD45GO95257 159 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 MAN2A2P49641 1150 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 HSPB3Q12988 150 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 CAMK1Q14012 370 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 UBAP2Q5T6F2 1119 aaKnown RBP14.26□□□□□ -0.13
PTPRU-204ENST00000428026 C17orf64Q86WR6 236 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 CPNE9Q8IYJ1 553 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 LRRC52Q8N7C0 313 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 OR10H4Q8NGA5 316 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 ZNF563Q8TA94 476 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 DNASE1L2Q92874 299 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 FAM129BQ96TA1 746 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 TBX5Q99593 518 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 DCSTAMPQ9H295 470 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 SLC6A15Q9H2J7 730 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 KCTD5Q9NXV2 234 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 CKLFQ9UBR5 152 aa14.26□□□□□ -0.13
PTPRU-204ENST00000428026 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 TMEM233B4DJY2 109 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 I3L521 148 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 SLC22A1O15245 554 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 ERN1O75460 977 aaKnown RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 ASLP04424 464 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 CHST15Q7LFX5 561 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 TMEM203Q969S6 136 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 KCNC2Q96PR1 638 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 CXorf49A8MYA2 514 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 E9PAM4 449 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 MPZL2O60487 215 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 TSPAN1O60635 241 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 RBMXL2O75526 392 aaKnown RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 S100GP29377 79 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 CTU1Q7Z7A3 348 aaKnown RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 SLC38A4Q969I6 547 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 C12orf43Q96C57 262 aaKnown RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 BRINP2Q9C0B6 783 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 SLC22A4Q9H015 551 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 OR51V1Q9H2C8 321 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 RNF186Q9NXI6 227 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 TAS2R7Q9NYW3 318 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 ACOX3O15254 700 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 TFPTP0C1Z6 253 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 CLK3P49761 638 aaKnown RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 GSCP56915 257 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 TUBA4AP68366 448 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 SERPINA13PQ6UXR4 307 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 ZMIZ2Q8NF64 920 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 ZNF296Q8WUU4 475 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 UFD1Q92890 307 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 CDK15Q96Q40 435 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 CDADC1Q9BWV3 514 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 RCOR3Q9P2K3 495 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 RGS17Q9UGC6 210 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 DLG5Q8TDM6 1919 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 GRIA1P42261 906 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 SLC1A2P43004 574 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 ASMTP46597 345 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 CDH4P55283 916 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 AP3S2P59780 193 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 PCDH19Q8TAB3 1148 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 DCAKDQ8WVC6 231 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 NKD1Q969G9 470 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 EVLQ9UI08 416 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 CD84Q9UIB8 345 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 SPIN1Q9Y657 262 aaPredicted RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 A0A0G2JPF8 293 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 TCAF2A6NFQ2 919 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 HNRNPCL3B7ZW38 293 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 ARPC2O15144 300 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 MAGEB3O15480 346 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 PRAMEF1O95521 474 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 ELFN1P0C7U0 828 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 HNRNPCL4P0DMR1 293 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 VARSP26640 1264 aaKnown RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 RAB2AP61019 212 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 CYP1B1Q16678 543 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 TOP6BLQ8N6T0 577 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 SMG8Q8ND04 991 aaKnown RBP14.25□□□□□ -0.13
PTPRU-204ENST00000428026 ASB9Q96DX5 294 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 TTLL2Q9BWV7 592 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 SIX2Q9NPC8 291 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 DNAJB4Q9UDY4 337 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 PCDHB1Q9Y5F3 818 aa14.25□□□□□ -0.13
PTPRU-204ENST00000428026 COL1A1P02452 1464 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-204ENST00000428026 A0A1W2PPW3 197 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 RIIAD1A6NNX1 92 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 A8MV72 311 aaPredicted RBP14.24□□□□□ -0.13
PTPRU-204ENST00000428026 LAMP2P13473 410 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 GABRR2P28476 465 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 CHIT1Q13231 466 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 LAPTM5Q13571 262 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 ATAD1Q8NBU5 361 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 STYXQ8WUJ0 223 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 STON2Q8WXE9 905 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 WDR37Q9Y2I8 494 aa14.24□□□□□ -0.13
PTPRU-204ENST00000428026 RSL1D1O76021 490 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms