RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TMEM114B3SHH9 223 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 TCP11X1B4DZS4 312 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 TK2O00142 265 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 FFAR2O15552 330 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 HRO43593 1189 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 NPHS1O60500 1241 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 SERPINE1P05121 402 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 SBK3P0C264 359 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 SLC2A4P14672 509 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 ACADLP28330 430 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 NDUFS1P28331 727 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 PDHA2P29803 388 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 NAGLUP54802 743 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 NFKB2Q00653 900 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 CTBSQ01459 385 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 GALNT1Q10472 559 aaPredicted RBP10.09□□□□□ -0.79
MDC1-205ENST00000425072 FZD2Q14332 565 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 KRT33BQ14525 404 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 PCLAFQ15004 111 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 ALG11Q2TAA5 492 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 ANKS6Q68DC2 871 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 CAPRIN2Q6IMN6 1127 aaKnown RBP10.09□□□□□ -0.79
MDC1-205ENST00000425072 SBSNQ6UWP8 590 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 ABRAXAS1Q6UWZ7 409 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 PARGQ86W56 976 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 VRK3Q8IV63 474 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 CEP76Q8TAP6 659 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 GPBAR1Q8TDU6 330 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 ZFPM2Q8WW38 1151 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 PHF21BQ96EK2 531 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 CHMP6Q96FZ7 201 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 SLC6A18Q96N87 628 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 EGFL8Q99944 293 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 TRMOQ9BU70 441 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 ILKAPQ9H0C8 392 aaPredicted RBP10.09□□□□□ -0.79
MDC1-205ENST00000425072 NSRP1Q9H0G5 558 aaKnown RBP10.09□□□□□ -0.79
MDC1-205ENST00000425072 EPN3Q9H201 632 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 OR52A5Q9H2C5 316 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 OSGEPL1Q9H4B0 414 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 ERVMER34-1Q9H9K5 563 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 MRPL40Q9NQ50 206 aaKnown RBP10.09□□□□□ -0.79
MDC1-205ENST00000425072 ARL15Q9NXU5 204 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 PCOLCE2Q9UKZ9 415 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 PDE10AQ9Y233 779 aa10.09□□□□□ -0.79
MDC1-205ENST00000425072 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.09□□□□□ -0.79
MDC1-205ENST00000425072 DCHS1Q96JQ0 3298 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 ZNF839A8K0R7 811 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 PDZK1P1A8MUH7 402 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 UBXN8O00124 270 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 GIPC1O14908 333 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 DFNA5O60443 496 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 SHOX2O60902 331 aaPredicted RBP10.08□□□□□ -0.8
MDC1-205ENST00000425072 SUPT7LO94864 414 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 C1orf105O95561 183 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 CSF2P04141 144 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 SP9P0CG40 484 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 FGF3P11487 239 aaPredicted RBP10.08□□□□□ -0.8
MDC1-205ENST00000425072 MTHFD2P13995 350 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 JUNDP17535 347 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 BGNP21810 368 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 HOXD12P35452 270 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 GGT5P36269 586 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 PREPP48147 710 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 SLC1A6P48664 564 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 PIK3CGP48736 1102 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 ABCE1P61221 599 aaKnown RBP10.08□□□□□ -0.8
MDC1-205ENST00000425072 HNRNPKP61978 463 aaKnown RBP eCLIP10.08□□□□□ -0.8
MDC1-205ENST00000425072 HERVK_113P63132 956 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 EIF2B5Q13144 721 aaKnown RBP10.08□□□□□ -0.8
MDC1-205ENST00000425072 ELOCQ15369 112 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 UAP1L1Q3KQV9 507 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 PLA2G4EQ3MJ16 856 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 PLK5Q496M5 336 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 PMS2CLQ68D20 193 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 TTC19Q6DKK2 380 aaPredicted RBP10.08□□□□□ -0.8
MDC1-205ENST00000425072 FAM83HQ6ZRV2 1179 aaPredicted RBP10.08□□□□□ -0.8
MDC1-205ENST00000425072 PDZD3Q86UT5 571 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 CRLF3Q8IUI8 442 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 RASGRP3Q8IV61 690 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 TBC1D21Q8IYX1 336 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 SLC22A18ASQ8N1D0 253 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 CCNYL1Q8N7R7 359 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 PDPRQ8NCN5 879 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 OR6Y1Q8NGX8 325 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 L3HYPDHQ96EM0 354 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 FERD3LQ96RJ6 166 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 GATA5Q9BWX5 397 aaPredicted RBP10.08□□□□□ -0.8
MDC1-205ENST00000425072 C1QTNF3Q9BXJ4 246 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 ERVK-6Q9BXR3 956 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 ZDHHC5Q9C0B5 715 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 DRC3Q9H069 523 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 WWP1Q9H0M0 922 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 TMEM168Q9H0V1 697 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 TRIT1Q9H3H1 467 aaKnown RBP10.08□□□□□ -0.8
MDC1-205ENST00000425072 MVB12BQ9H7P6 319 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 TM7SF3Q9NS93 570 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 DNAJC28Q9NX36 388 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 UTP6Q9NYH9 597 aaKnown RBP10.08□□□□□ -0.8
MDC1-205ENST00000425072 SPASTQ9UBP0 616 aa10.08□□□□□ -0.8
MDC1-205ENST00000425072 PTBP2Q9UKA9 531 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms