RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 HIF1AQ16665 826 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 BTBD16Q32M84 506 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 COLEC12Q5KU26 742 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 USP51Q70EK9 711 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 ADGRG3Q86Y34 549 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 RP9Q8TA86 221 aaKnown RBP20.03■□□□□ 0.8
AP1S3-205ENST00000415298 ATOH1Q92858 354 aaPredicted RBP20.03■□□□□ 0.8
AP1S3-205ENST00000415298 RIT1Q92963 219 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 MYDGFQ969H8 173 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 PBXIP1Q96AQ6 731 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 INSL6Q9Y581 213 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 MYBPHLA2RUH7 354 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 AVILO75366 819 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 BANF1O75531 89 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 FABP1P07148 127 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 ALOX12P18054 663 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 GARSP41250 739 aaKnown RBP20.03■□□□□ 0.8
AP1S3-205ENST00000415298 GAD2Q05329 585 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 SKIV2LQ15477 1246 aaKnown RBP20.03■□□□□ 0.8
AP1S3-205ENST00000415298 C21orf62-AS1Q17RA5 79 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 RETREG3Q86VR2 466 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 DNAJA4Q8WW22 397 aaPredicted RBP20.03■□□□□ 0.8
AP1S3-205ENST00000415298 CPA5Q8WXQ8 436 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 IGSF21Q96ID5 467 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 DGCR6LQ9BY27 220 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 BTBD3Q9Y2F9 522 aa20.03■□□□□ 0.8
AP1S3-205ENST00000415298 B4GAT1O43505 415 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 ZNF45Q02386 682 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 LGALS3BPQ08380 585 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 KCNC3Q14003 757 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 ACOX1Q15067 660 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 MROH9Q5TGP6 573 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 OVOS1Q6IE37 1185 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 UNC93AQ86WB7 457 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 TCTE3Q8IZS6 198 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 UBA3Q8TBC4 463 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 ZNF564Q8TBZ8 553 aaPredicted RBP20.02■□□□□ 0.8
AP1S3-205ENST00000415298 C6orf62Q9GZU0 229 aaPredicted RBP20.02■□□□□ 0.8
AP1S3-205ENST00000415298 NIPAL2Q9H841 368 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 CRTAC1Q9NQ79 661 aa20.02■□□□□ 0.8
AP1S3-205ENST00000415298 SPATA6Q9NWH7 488 aaPredicted RBP20.02■□□□□ 0.8
AP1S3-205ENST00000415298 RNF103-CHMP3A0A140T963 221 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 ANGPT2O15123 496 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 AKR7A2O43488 359 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 TIPRLO75663 272 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 CYP11A1P05108 521 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 OR4Q2P0C623 313 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 YWHAHQ04917 246 aaPredicted RBP20.02■□□□□ 0.79
AP1S3-205ENST00000415298 CRYBG2Q8N1P7 616 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 TMEM86AQ8N2M4 240 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 WDTC1Q8N5D0 677 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 COLGALT1Q8NBJ5 622 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 MCFD2Q8NI22 146 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 BLOC1S5Q8TDH9 187 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 IPCEF1Q8WWN9 437 aaPredicted RBP20.02■□□□□ 0.79
AP1S3-205ENST00000415298 SLC9A7Q96T83 725 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 SORT1Q99523 831 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 RAD9AQ99638 391 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 CHORDC1Q9UHD1 332 aaPredicted RBP20.02■□□□□ 0.79
AP1S3-205ENST00000415298 PCDHB8Q9UN66 801 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 PCDHGA2Q9Y5H1 932 aa20.02■□□□□ 0.79
AP1S3-205ENST00000415298 CCDC182A6NF36 153 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 STX16-NPEPL1H3BU86 382 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 CLDN5O00501 218 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 SSX4O60224 188 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 LYPLA1O75608 230 aaPredicted RBP20.01■□□□□ 0.79
AP1S3-205ENST00000415298 DENND1BQ6P3S1 775 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 COMMD7Q86VX2 200 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 B3GALNT2Q8NCR0 500 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 FAM156AQ8NDB6 213 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 RCN3Q96D15 328 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 ACSL5Q9ULC5 683 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 TSC2P49815 1807 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 PDE4DIPQ5VU43 2346 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 MEIOCA2RUB1 952 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 ZNF195O14628 629 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 RPS5P46782 204 aaKnown RBP20.01■□□□□ 0.79
AP1S3-205ENST00000415298 SLC1A6P48664 564 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 LHX1P48742 406 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 GRIK2Q13002 908 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 GPS1Q13098 491 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 KLF1Q13351 362 aaPredicted RBP20.01■□□□□ 0.79
AP1S3-205ENST00000415298 PLCL1Q15111 1095 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 ZMAT1Q5H9K5 638 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 EFL1Q7Z2Z2 1120 aaKnown RBP20.01■□□□□ 0.79
AP1S3-205ENST00000415298 FATE1Q969F0 183 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 RAD51AP1Q96B01 352 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 SIPA1Q96FS4 1042 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 ZNF558Q96NG5 402 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 TSPAN16Q9UKR8 245 aa20.01■□□□□ 0.79
AP1S3-205ENST00000415298 E5RI56 91 aa20■□□□□ 0.79
AP1S3-205ENST00000415298 SNX4O95219 450 aa20■□□□□ 0.79
AP1S3-205ENST00000415298 VAPBO95292 243 aa20■□□□□ 0.79
AP1S3-205ENST00000415298 LDOC1O95751 146 aaPredicted RBP20■□□□□ 0.79
AP1S3-205ENST00000415298 TOP3BO95985 862 aaKnown RBP20■□□□□ 0.79
AP1S3-205ENST00000415298 EPOP01588 193 aa20■□□□□ 0.79
AP1S3-205ENST00000415298 TSHRP16473 764 aa20■□□□□ 0.79
AP1S3-205ENST00000415298 ART3Q13508 389 aa20■□□□□ 0.79
AP1S3-205ENST00000415298 CYBRD1Q53TN4 286 aa20■□□□□ 0.79
AP1S3-205ENST00000415298 RSPO2Q6UXX9 243 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms