RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 OR6C74A6NCV1 312 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 EIF4E1BA6NMX2 242 aaKnown RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 A8MU76 341 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 BHMG1C9JSJ3 638 aaPredicted RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 ATXN7O15265 892 aaPredicted RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 EIF3HO15372 352 aaKnown RBP eCLIP6.21□□□□□ -1.42
USP54-202ENST00000413442 KLHL41O60662 606 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 SRPX2O60687 465 aaPredicted RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 PRAMEF10O60809 474 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 MATN4O95460 622 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 S1PR4O95977 384 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 IGHEP01854 428 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 GSTA2P09210 222 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 PIM1P11309 404 aaPredicted RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 CCL4P13236 92 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 PKMP14618 531 aaKnown RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 TYRP1P17643 537 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 PGAM1P18669 254 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 ITIH1P19827 911 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 CDH3P22223 829 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 MGAT1P26572 445 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 NMBRP28336 390 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 PRDX3P30048 256 aaKnown RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 CCR7P32248 378 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 CSF2RBP32927 897 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 GRIA1P42261 906 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 LEPRP48357 1165 aaKnown RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 CDKN1CP49918 316 aaPredicted RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 RAB28P51157 221 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 CLDN6P56747 220 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 DR1Q01658 176 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 CALCOCO2Q13137 446 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 CLN3Q13286 438 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 OLIG2Q13516 323 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 SEPT7Q16181 437 aaKnown RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 KYNUQ16719 465 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 SLC5A12Q1EHB4 618 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 PLA2G4EQ3MJ16 856 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 CCDC38Q502W7 563 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 ZC3H12BQ5HYM0 836 aaKnown RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 SPANXN3Q5MJ09 141 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 RNASEH2BQ5TBB1 312 aaKnown RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 YOD1Q5VVQ6 348 aaPredicted RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 IRGCQ6NXR0 463 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 TTC27Q6P3X3 843 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 CASC4Q6P4E1 433 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 C6orf15Q6UXA7 325 aaPredicted RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 FAM129CQ86XR2 697 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 MARCH9Q86YJ5 346 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 CILP2Q8IUL8 1156 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 DCUN1D3Q8IWE4 304 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 SFTPA2Q8IWL1 248 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 CACNA2D3Q8IZS8 1091 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 RCBTB1Q8NDN9 531 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 OR4E2Q8NGC2 313 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 COG1Q8WTW3 980 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 KCNJ9Q92806 393 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 MFSD3Q96ES6 412 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 STAMBPL1Q96FJ0 436 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 MS4A14Q96JA4 679 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 ZNF778Q96MU6 729 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 FCRL3Q96P31 734 aaPredicted RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 SERPINB12Q96P63 405 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 IP6K3Q96PC2 410 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 TGM7Q96PF1 710 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 EBNA1BP2Q99848 306 aaKnown RBP6.21□□□□□ -1.42
USP54-202ENST00000413442 FAM129AQ9BZQ8 928 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 KCNF1Q9H3M0 494 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 OCIAD1Q9NX40 245 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 SPATA7Q9P0W8 599 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 ASIC3Q9UHC3 531 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 POMT2Q9UKY4 750 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 KLK4Q9Y5K2 254 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 B3GALT1Q9Y5Z6 326 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 RPS6KL1Q9Y6S9 549 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 BPTFQ12830 3046 aa6.21□□□□□ -1.42
USP54-202ENST00000413442 DMXL2Q8TDJ6 3036 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 MAP1BP46821 2468 aaKnown RBP6.2□□□□□ -1.42
USP54-202ENST00000413442 ZCWPW2A0A1B0GU75 182 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 ZNF891A8MT65 544 aaPredicted RBP6.2□□□□□ -1.42
USP54-202ENST00000413442 E5RI56 91 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 TXNDC9O14530 226 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 EFSO43281 561 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 ZBTB14O43829 449 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 RAD1O60671 282 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 SPAG6O75602 509 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 KRT37O76014 449 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 STK17BO94768 372 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 RAB40ALP0C0E4 278 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 MPC1LP0DKB6 136 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 CHRM3P20309 590 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 IVDP26440 423 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 ITPKBP27987 946 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 PDHA2P29803 388 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 PBLDP30039 288 aaPredicted RBP6.2□□□□□ -1.42
USP54-202ENST00000413442 CASQ1P31415 396 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 CA5AP35218 305 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 ETV5P41161 510 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 PTGIRP43119 386 aa6.2□□□□□ -1.42
USP54-202ENST00000413442 RGS4P49798 205 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms