RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ESX1Q8N693 406 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 CPT1BQ92523 772 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 FAM136AQ96C01 138 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 TRIT1Q9H3H1 467 aaKnown RBP9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 TFB2MQ9H5Q4 396 aaKnown RBP9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 KCND1Q9NSA2 647 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 ACTR10Q9NZ32 417 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 SEMA5BQ9P283 1151 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 CROTQ9UKG9 612 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 ICKQ9UPZ9 632 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 ITPR1Q14643 2758 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 SCN8AQ9UQD0 1980 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 CACNA1GO43497 2377 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 LOC400499M0QZD8 3231 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 SMG1Q96Q15 3661 aaKnown RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 PIPSLA2A3N6 862 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZNF891A8MT65 544 aaPredicted RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 AP3B1O00203 1094 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 PGRMC1O00264 195 aaKnown RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 TMEM63AO94886 807 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZBTB11O95625 1053 aaPredicted RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 GSTM1P09488 218 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 ST6GAL1P15907 406 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 TCN2P20062 427 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 ARNTP27540 789 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 STAT5AP42229 794 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 EIF3BP55884 814 aaKnown RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 SARNPP82979 210 aaKnown RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 GSTM4Q03013 218 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 ERV3-1Q14264 604 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 DEFB109BQ30KR1 87 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 AARS2Q5JTZ9 985 aaKnown RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 SDCCAG8Q86SQ7 713 aaPredicted RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 CAND1Q86VP6 1230 aaKnown RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 HOOK3Q86VS8 718 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 TBC1D21Q8IYX1 336 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 ADGRF3Q8IZF5 1079 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 D2HGDHQ8N465 521 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 LSM14AQ8ND56 463 aaKnown RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 ACTRT1Q8TDG2 376 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 SKA2Q8WVK7 121 aaPredicted RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 ANP32BQ92688 251 aaKnown RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 CAPZA3Q96KX2 299 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 IL17FQ96PD4 163 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 TRAPPC9Q96Q05 1148 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 RUFY1Q96T51 708 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 NAP1L3Q99457 506 aaPredicted RBP9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 CD180Q99467 661 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 KIFC1Q9BW19 673 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 CARD6Q9BX69 1037 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 SPHK1Q9NYA1 384 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 POMT2Q9UKY4 750 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 PADI1Q9ULC6 663 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 SNX12Q9UMY4 172 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 SOX13Q9UN79 622 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 KLHL20Q9Y2M5 609 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 CRYL1Q9Y2S2 319 aa9.87□□□□□ -0.83
NCKIPSD-202ENST00000413374 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 C2orf74A8MZ97 194 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 ISM1B1AKI9 464 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 F8W8V4 182 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 PRMT5O14744 637 aaPredicted RBP9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 PHF2O75151 1096 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 SCRG1O75711 98 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 APOA4P06727 396 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 CHRM5P08912 532 aaPredicted RBP9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 AOAHP28039 575 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 OAS2P29728 719 aaKnown RBP9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 TTPAP49638 278 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 GNG11P61952 73 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 TUBB4BP68371 445 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 CDK16Q00536 496 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 NFKB2Q00653 900 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 NFATC3Q12968 1075 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 TUBB2AQ13885 445 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 CYP1B1Q16678 543 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 CTSL3PQ5NE16 218 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZNF605Q86T29 641 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 TMEM135Q86UB9 458 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 TAX1BP1Q86VP1 789 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 KMT5CQ86Y97 462 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 TMEM126BQ8IUX1 230 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 OR1L3Q8NH93 324 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 OR5K2Q8NHB8 316 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 CT55Q8WUE5 264 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 STARD8Q92502 1023 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 PEX13Q92968 403 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZNF501Q96CX3 271 aaPredicted RBP9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 MED8Q96G25 268 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 WBP1Q96G27 269 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 SGSM3Q96HU1 749 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 SLC45A3Q96JT2 553 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 TUBB2BQ9BVA1 445 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 TSSK1BQ9BXA7 367 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 P2RY12Q9H244 342 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 LHX9Q9NQ69 397 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 C1GALT1Q9NS00 363 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 SAMD15Q9P1V8 674 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 GALPQ9UBC7 116 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms