RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 GTSE1Q9NYZ3 720 aa5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 FAM30AQ9NZY2 134 aa5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 DBF4Q9UBU7 674 aaPredicted RBP5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 NKX1-2Q9UD57 310 aaPredicted RBP5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 CD300AQ9UGN4 299 aa5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 EBF1Q9UH73 591 aa5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 ZFP69BQ9UJL9 534 aa5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 PADI2Q9Y2J8 665 aa5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 REXO2Q9Y3B8 237 aaKnown RBP5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 TMEM184BQ9Y519 407 aaPredicted RBP5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 KIF14Q15058 1648 aa5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 GPATCH8Q9UKJ3 1502 aaKnown RBP5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 RTEL1-TNFRSF6BF6WH68 1400 aa5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 NPHP4O75161 1426 aaPredicted RBP5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 PNPLA7Q6ZV29 1317 aa5.73□□□□□ -1.49
CBX1P3-201ENST00000413296 C3P01024 1663 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 CCDC18Q5T9S5 1454 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 FITM1A5D6W6 292 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 OR6C65A6NJZ3 312 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 BECN2A8MW95 431 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 KIAA1324LA8MWY0 1029 aaPredicted RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 KLRF2D3W0D1 207 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 FFAR3O14843 346 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 GPR42O15529 346 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 STRNO43815 780 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 EXTL3O43909 919 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 KLK8O60259 260 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 FCGR3BO75015 233 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 CSO75390 466 aaKnown RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 CRTAPO75718 401 aaPredicted RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 RAD51DO75771 328 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 SERPINI2O75830 405 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 KLHL2O95198 593 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 C8AP07357 584 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 HMBSP08397 361 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 PABPC4LP0CB38 370 aaKnown RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 F3P13726 295 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 ZNF24P17028 368 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 IGFBP2P18065 325 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 PSMB4P28070 264 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 PRDX6P30041 224 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 PPIFP30405 207 aaKnown RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 CSTF2P33240 577 aaKnown RBP eCLIP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 RAP1GAPP47736 663 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 ALDH7A1P49419 539 aaKnown RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 RPL23AP62750 156 aaKnown RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 UBE2IP63279 158 aaKnown RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 RESTQ13127 1097 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 XRCC4Q13426 336 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 SSX2Q16385 188 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 CR1LQ2VPA4 569 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 PLEKHO1Q53GL0 409 aaPredicted RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 SGO1Q5FBB7 561 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 PRAMEF7Q5VXH5 474 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 KIAA1161Q6NSJ0 714 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 B3GLCTQ6Y288 498 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 RNF144BQ7Z419 303 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 MRPL10Q7Z7H8 261 aaKnown RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 STK32CQ86UX6 486 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 SERINC5Q86VE9 423 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 KLHDC8AQ8IYD2 350 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 OFCC1Q8IZS5 231 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 CRYBG2Q8N1P7 616 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 STPG3Q8N7X2 389 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 AMER3Q8N944 861 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 DNAAF3Q8N9W5 541 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 TP53I13Q8NBR0 393 aaPredicted RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 C17orf47Q8NEP4 570 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 POC1BQ8TC44 478 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 SLC2A14Q8TDB8 520 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 FAM46AQ96IP4 442 aaKnown RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 C12orf66Q96MD2 445 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 ZNF583Q96ND8 569 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 BTBD9Q96Q07 612 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 ALG12Q9BV10 488 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 NUP58Q9BVL2 599 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 TSPYL1Q9H0U9 437 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 SLC26A1Q9H2B4 701 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 AZI2Q9H6S1 392 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 MAGEF1Q9HAY2 307 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 TREM1Q9NP99 234 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 SDHAF3Q9NRP4 125 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 FAM207AQ9NSI2 230 aaPredicted RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 NDUFA13Q9P0J0 144 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 ATXN10Q9UBB4 475 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 UPB1Q9UBR1 384 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 GPR132Q9UNW8 380 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 FAM96BQ9Y3D0 163 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 FAM135AQ9P2D6 1515 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 FAM135BQ49AJ0 1406 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 MAST3O60307 1309 aa5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 MED1Q15648 1581 aaPredicted RBP5.72□□□□□ -1.49
CBX1P3-201ENST00000413296 OR6C68A6NDL8 312 aa5.71□□□□□ -1.5
CBX1P3-201ENST00000413296 ANKRD61A6NGH8 418 aa5.71□□□□□ -1.5
CBX1P3-201ENST00000413296 GRXCR1A8MXD5 290 aa5.71□□□□□ -1.5
CBX1P3-201ENST00000413296 SUPT3HB4E1H0 165 aa5.71□□□□□ -1.5
CBX1P3-201ENST00000413296 TARM1B6A8C7 271 aa5.71□□□□□ -1.5
CBX1P3-201ENST00000413296 H3BMM5 538 aa5.71□□□□□ -1.5
CBX1P3-201ENST00000413296 CLDN4O14493 209 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms