RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 PIAS4Q8N2W9 510 aaPredicted RBP17.18■□□□□ 0.34
LSM5-204ENST00000409909 MFSD3Q96ES6 412 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 C1GALT1Q9NS00 363 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 ICKQ9UPZ9 632 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 CDYLQ9Y232 598 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 ASF1AQ9Y294 204 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 BTRCQ9Y297 605 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 NEU2Q9Y3R4 380 aa17.18■□□□□ 0.34
LSM5-204ENST00000409909 MRPS18BQ9Y676 258 aaKnown RBP17.18■□□□□ 0.34
LSM5-204ENST00000409909 AP3B1O00203 1094 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 MATN2O00339 956 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 NTRK1P04629 796 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 CDH3P22223 829 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 COILP38432 576 aaPredicted RBP17.17■□□□□ 0.34
LSM5-204ENST00000409909 TUBB4BP68371 445 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 PLOD1Q02809 727 aaPredicted RBP17.17■□□□□ 0.34
LSM5-204ENST00000409909 TUBB2AQ13885 445 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 CYP1B1Q16678 543 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 SYTL3Q4VX76 610 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 AARS2Q5JTZ9 985 aaKnown RBP17.17■□□□□ 0.34
LSM5-204ENST00000409909 CYB5D1Q6P9G0 228 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 UNC5AQ6ZN44 842 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 CAND1Q86VP6 1230 aaKnown RBP17.17■□□□□ 0.34
LSM5-204ENST00000409909 BPHLQ86WA6 291 aaPredicted RBP17.17■□□□□ 0.34
LSM5-204ENST00000409909 ZNF501Q96CX3 271 aaPredicted RBP17.17■□□□□ 0.34
LSM5-204ENST00000409909 STAMBPL1Q96FJ0 436 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 FCRL4Q96PJ5 515 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 ARHGAP9Q9BRR9 750 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 EFHD1Q9BUP0 239 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 TUBB2BQ9BVA1 445 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 CARD6Q9BX69 1037 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 PITPNM3Q9BZ71 974 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 P2RY12Q9H244 342 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 AKIRIN1Q9H9L7 192 aaPredicted RBP17.17■□□□□ 0.34
LSM5-204ENST00000409909 MRM3Q9HC36 420 aaKnown RBP17.17■□□□□ 0.34
LSM5-204ENST00000409909 ANAPC5Q9UJX4 755 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 CROTQ9UKG9 612 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 SPTA1P02549 2419 aa17.17■□□□□ 0.34
LSM5-204ENST00000409909 TENM4Q6N022 2769 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 PRMT5O14744 637 aaPredicted RBP17.16■□□□□ 0.34
LSM5-204ENST00000409909 GPC4O75487 556 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 VAPBO95292 243 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 PRKAR1AP10644 381 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 ST6GAL1P15907 406 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 AOAHP28039 575 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 DLSTP36957 453 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 PPARGP37231 505 aaPredicted RBP17.16■□□□□ 0.34
LSM5-204ENST00000409909 TTPAP49638 278 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 HSPA14Q0VDF9 509 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 TBC1D21Q8IYX1 336 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 SLC22A15Q8IZD6 547 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 KRT222Q8N1A0 295 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 MPP5Q8N3R9 675 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 OR5K2Q8NHB8 316 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 STARD8Q92502 1023 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 CPT1BQ92523 772 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 OSBPL9Q96SU4 736 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 KLHL25Q9H0H3 589 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 KCND1Q9NSA2 647 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 SOHLH2Q9NX45 425 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 TRMT1Q9NXH9 659 aaKnown RBP17.16■□□□□ 0.34
LSM5-204ENST00000409909 ACTR10Q9NZ32 417 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 PADI1Q9ULC6 663 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 SOX13Q9UN79 622 aa17.16■□□□□ 0.34
LSM5-204ENST00000409909 TDRKHQ9Y2W6 561 aaKnown RBP17.16■□□□□ 0.34
LSM5-204ENST00000409909 C2orf74A8MZ97 194 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 PGRMC1O00264 195 aaKnown RBP17.15■□□□□ 0.34
LSM5-204ENST00000409909 ZSCAN12O43309 604 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 TMEM63AO94886 807 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 CCNYL3P0C7X3 344 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 PVRP15151 417 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 OAS2P29728 719 aaKnown RBP17.15■□□□□ 0.34
LSM5-204ENST00000409909 TMTC4Q5T4D3 741 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 ATP1A1-AS1Q5TC04 95 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 PRAMEF17Q5VTA0 474 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 BORAQ6PGQ7 559 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 CCDC137Q6PK04 289 aaKnown RBP17.15■□□□□ 0.34
LSM5-204ENST00000409909 SLC38A9Q8NBW4 561 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 ACTRT1Q8TDG2 376 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 TRAPPC9Q96Q05 1148 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 TRIM56Q9BRZ2 755 aaKnown RBP17.15■□□□□ 0.34
LSM5-204ENST00000409909 TWSG1Q9GZX9 223 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 LHX9Q9NQ69 397 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 SPHK1Q9NYA1 384 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 POLG2Q9UHN1 485 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 PLAGL1Q9UM63 463 aa17.15■□□□□ 0.34
LSM5-204ENST00000409909 GOLGA8KD6RF30 607 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 F8W8V4 182 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 GOLGA8TH3BQL2 631 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 ZNF185O15231 689 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 SCRG1O75711 98 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 SLCO2B1O94956 709 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 MT-ND3P03897 115 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 CHRM5P08912 532 aaPredicted RBP17.14■□□□□ 0.33
LSM5-204ENST00000409909 SHMT2P34897 504 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 CDC20Q12834 499 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 ABRQ12979 859 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 FAM199XQ6PEV8 388 aaPredicted RBP17.14■□□□□ 0.33
LSM5-204ENST00000409909 SPESP1Q6UW49 350 aa17.14■□□□□ 0.33
LSM5-204ENST00000409909 TRIM73Q86UV7 250 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms