RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 RPS18P62269 152 aaKnown RBP14.29□□□□□ -0.12
CBX3-203ENST00000409747 AFTPHQ6ULP2 937 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 PPP1R21Q6ZMI0 780 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 DSELQ8IZU8 1212 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 PHC3Q8NDX5 983 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 ELMO1Q92556 727 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 RUFY1Q96T51 708 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 DPH2Q9BQC3 489 aaPredicted RBP14.29□□□□□ -0.12
CBX3-203ENST00000409747 CHST8Q9H2A9 424 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 ACTR5Q9H9F9 607 aaPredicted RBP14.29□□□□□ -0.12
CBX3-203ENST00000409747 AKIRIN1Q9H9L7 192 aaPredicted RBP14.29□□□□□ -0.12
CBX3-203ENST00000409747 ACTR10Q9NZ32 417 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 SNX7Q9UNH6 387 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 ASF1AQ9Y294 204 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 CAPN6Q9Y6Q1 641 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 PIKFYVEQ9Y2I7 2098 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 E7EQ34 232 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 SUN1O94901 812 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 PPARGP37231 505 aaPredicted RBP14.29□□□□□ -0.12
CBX3-203ENST00000409747 ITGA1P56199 1179 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 ABRQ12979 859 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 PRKG2Q13237 762 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 SPESP1Q6UW49 350 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 TBC1D21Q8IYX1 336 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 ADGRF3Q8IZF5 1079 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 TAB3Q8N5C8 712 aaPredicted RBP14.29□□□□□ -0.12
CBX3-203ENST00000409747 OR52K1Q8NGK4 314 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 OR1L3Q8NH93 324 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 ATG4AQ8WYN0 398 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 N4BP2L2Q92802 583 aaPredicted RBP14.29□□□□□ -0.12
CBX3-203ENST00000409747 TRAPPC9Q96Q05 1148 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 RANBP9Q96S59 729 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 TSSK1BQ9BXA7 367 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 NLNQ9BYT8 704 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 ACSS2Q9NR19 701 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 RIMKLBQ9ULI2 386 aa14.29□□□□□ -0.12
CBX3-203ENST00000409747 TCRBV7S2A1N4TA0A589 114 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 CCDC78A2IDD5 438 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 CCDC162PA2VCL2 907 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 LIASO43766 372 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 IFNB1P01574 187 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 FOXN2P32314 431 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 RORAP35398 523 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 IL10RAQ13651 578 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 OASLQ15646 514 aaKnown RBP14.28□□□□□ -0.12
CBX3-203ENST00000409747 CCDC38Q502W7 563 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 PLEKHS1Q5SXH7 462 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 NLRP9Q7RTR0 991 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 SYTL1Q8IYJ3 562 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 GPR135Q8IZ08 494 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 ENDOVQ8N8Q3 282 aaKnown RBP14.28□□□□□ -0.12
CBX3-203ENST00000409747 SLC38A9Q8NBW4 561 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 OR5AR1Q8NGP9 310 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 PEX13Q92968 403 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 C17orf62Q9BQA9 187 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 PCMTD2Q9NV79 361 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 OR6C2Q9NZP2 312 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 G3BP2Q9UN86 482 aaKnown RBP14.28□□□□□ -0.12
CBX3-203ENST00000409747 ICKQ9UPZ9 632 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 ZNF148Q9UQR1 794 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 PADI2Q9Y2J8 665 aa14.28□□□□□ -0.12
CBX3-203ENST00000409747 SPENQ96T58 3664 aaKnown RBP14.28□□□□□ -0.12
CBX3-203ENST00000409747 C9J4A7 227 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 KRT86O43790 486 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 NR1D1P20393 614 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 ADRA1DP25100 572 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 PGDP52209 483 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 ZNF789Q5FWF6 425 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 ATCAYQ86WG3 371 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 CCDC89Q8N998 374 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 C19orf47Q8N9M1 422 aaKnown RBP14.27□□□□□ -0.12
CBX3-203ENST00000409747 OR13J1Q8NGT2 312 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 OR5K2Q8NHB8 316 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 TCTN2Q96GX1 697 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 SLC25A23Q9BV35 468 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 CHRNA10Q9GZZ6 450 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 XKR8Q9H6D3 395 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 ETNK1Q9HBU6 452 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 TCFL5Q9UL49 500 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 PCDHGA9Q9Y5G4 932 aaKnown RBP14.27□□□□□ -0.12
CBX3-203ENST00000409747 PRSS21Q9Y6M0 314 aa14.27□□□□□ -0.12
CBX3-203ENST00000409747 COL12A1Q99715 3063 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 FLNCQ14315 2725 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 A0A0U1RQJ8 604 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 SLC5A10A0PJK1 596 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 OR51F1A6NGY5 319 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 ARGFXA6NJG6 315 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 DNAJB5O75953 348 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 AGXTP21549 392 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 ACADLP28330 430 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 AARS2Q5JTZ9 985 aaKnown RBP14.27□□□□□ -0.13
CBX3-203ENST00000409747 TSTD2Q5T7W7 516 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 UNC5AQ6ZN44 842 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 CDHR3Q6ZTQ4 885 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 SLC13A5Q86YT5 568 aaPredicted RBP14.27□□□□□ -0.13
CBX3-203ENST00000409747 SPC24Q8NBT2 197 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 HDAC10Q969S8 669 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 DHRS4Q9BTZ2 278 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 TRIM55Q9BYV6 548 aa14.27□□□□□ -0.13
CBX3-203ENST00000409747 ING2Q9H160 280 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms