RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 LSM8O95777 96 aaKnown RBP3.34□□□□□ -1.87
NEB-204ENST00000409198 SFTPBP07988 381 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 VHLP40337 213 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 DHCR24Q15392 516 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 C1orf94Q6P1W5 598 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 KYQ8NBH2 561 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 C2orf15Q8WU43 125 aaKnown RBP3.34□□□□□ -1.87
NEB-204ENST00000409198 SORCS1Q8WY21 1168 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 BSCL2Q96G97 398 aaPredicted RBP3.34□□□□□ -1.87
NEB-204ENST00000409198 PDLIM2Q96JY6 352 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 ZFRQ96KR1 1074 aaKnown RBP3.34□□□□□ -1.87
NEB-204ENST00000409198 CCDC28BQ9BUN5 200 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 TREHO43280 583 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 FKBP6O75344 327 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 RAP1GAPP47736 663 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 SCNN1GP51170 649 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 IRAK1P51617 712 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 TNFAIP8L3Q5GJ75 292 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 PRICKLE2Q7Z3G6 844 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 C14orf80Q86SX3 495 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 DEFB106AQ8N104 65 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 DEFB123Q8N688 67 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 ING5Q8WYH8 240 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 NCSTNQ92542 709 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 KAT8Q9H7Z6 458 aaKnown RBP3.34□□□□□ -1.87
NEB-204ENST00000409198 AGPAT4Q9NRZ5 378 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 LYARQ9NX58 379 aaKnown RBP3.34□□□□□ -1.87
NEB-204ENST00000409198 RARRES3Q9UL19 164 aa3.34□□□□□ -1.87
NEB-204ENST00000409198 NUP153P49790 1475 aaKnown RBP3.34□□□□□ -1.87
NEB-204ENST00000409198 DUXAA6NLW8 204 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 CLCA1A8K7I4 914 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 TGM6O95932 706 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 MTHFD2P13995 350 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 OTX2P32243 289 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 ACADVLP49748 655 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 TNK2Q07912 1038 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 CD47Q08722 323 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 ZNF543Q08ER8 600 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 RABL6Q3YEC7 729 aaPredicted RBP3.34□□□□□ -1.88
NEB-204ENST00000409198 SMARCD3Q6STE5 483 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 GPR137CQ8N3F9 429 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 C12orf45Q8N5I9 185 aaPredicted RBP3.34□□□□□ -1.88
NEB-204ENST00000409198 SPERTQ8NA61 448 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 LINC00301Q8NCQ3 95 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 STOML3Q8TAV4 291 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 PXYLP1Q8TE99 480 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 FAM83CQ9BQN1 747 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 ACTR3BQ9P1U1 418 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 CHD4Q14839 1912 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 A0A1B0GVM2 712 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 A0A1W2PPW3 197 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 TCAF2A6NFQ2 919 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 IFNA5P01569 189 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 LTA4HP09960 611 aaKnown RBP3.34□□□□□ -1.88
NEB-204ENST00000409198 CTPS1P17812 591 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 CYP4F8P98187 520 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 CXorf57Q6NSI4 855 aaKnown RBP3.34□□□□□ -1.88
NEB-204ENST00000409198 TRIM74Q86UV6 250 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 TRIM73Q86UV7 250 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 DIO2Q92813 273 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 TIMD4Q96H15 378 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 CELF6Q96J87 481 aaKnown RBP3.34□□□□□ -1.88
NEB-204ENST00000409198 NECTIN4Q96NY8 510 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 CPNE1Q99829 537 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 RBCK1Q9BYM8 510 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 AGO1Q9UL18 857 aaKnown RBP3.34□□□□□ -1.88
NEB-204ENST00000409198 ATXN2Q99700 1313 aaKnown RBP3.34□□□□□ -1.88
NEB-204ENST00000409198 GGT3PA6NGU5 568 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 DIRAS3O95661 229 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 IL7RP16871 459 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 PTPN6P29350 595 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 ADSSP30520 456 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 HOXC8P31273 242 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 DLSTP36957 453 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 KHKP50053 298 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 FXR1P51114 621 aaKnown RBP eCLIP3.34□□□□□ -1.88
NEB-204ENST00000409198 C1QTNF8P60827 252 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 FAM83AQ86UY5 434 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 SLC38A4Q969I6 547 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 NELL2Q99435 816 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 TMEM79Q9BSE2 394 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 GPATCH2LQ9NWQ4 482 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 KIDINS220Q9ULH0 1771 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 A0A0G2JPF8 293 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 HNRNPCL3B7ZW38 293 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 OR1F1O43749 312 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 ITGA10O75578 1167 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 THEGLP0DJG4 465 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 HNRNPCL4P0DMR1 293 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 GALCP54803 685 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 MCL1Q07820 350 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 NR1I3Q14994 352 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 PRAMEF17Q5VTA0 474 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 CXCL17Q6UXB2 119 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 IL17RCQ8NAC3 791 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 ATAD1Q8NBU5 361 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 CCDC107Q8WV48 283 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 DDX47Q9H0S4 455 aaKnown RBP3.34□□□□□ -1.88
NEB-204ENST00000409198 TM9SF3Q9HD45 589 aa3.34□□□□□ -1.88
NEB-204ENST00000409198 DNAJB11Q9UBS4 358 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms