RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 TFGQ92734 400 aaPredicted RBP19.97■□□□□ 0.79
CHKB-201ENST00000406938 C12orf66Q96MD2 445 aa19.97■□□□□ 0.79
CHKB-201ENST00000406938 NCKIPSDQ9NZQ3 722 aa19.97■□□□□ 0.79
CHKB-201ENST00000406938 SNX11Q9Y5W9 270 aa19.97■□□□□ 0.79
CHKB-201ENST00000406938 PABPN1LA6NDY0 278 aaKnown RBP19.96■□□□□ 0.79
CHKB-201ENST00000406938 KLK8O60259 260 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 C1orf105O95561 183 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 EML2O95834 649 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 FGF3P11487 239 aaPredicted RBP19.96■□□□□ 0.79
CHKB-201ENST00000406938 MAP4P27816 1152 aaKnown RBP19.96■□□□□ 0.79
CHKB-201ENST00000406938 HOXD12P35452 270 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 CTSKP43235 329 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 BNC1Q01954 994 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 CLCA4Q14CN2 919 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 CHI3L2Q15782 390 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 LIPMQ5VYY2 423 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 DUS1LQ6P1R4 473 aaKnown RBP19.96■□□□□ 0.79
CHKB-201ENST00000406938 ZCCHC23Q6ZST2 131 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 PDPRQ8NCN5 879 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 OR5AR1Q8NGP9 310 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 MCOLN3Q8TDD5 553 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 CCDC126Q96EE4 140 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 INSM2Q96T92 566 aaPredicted RBP19.96■□□□□ 0.79
CHKB-201ENST00000406938 EGFL8Q99944 293 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 CAPS2Q9BXY5 557 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 TRIM54Q9BYV2 358 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 ARL15Q9NXU5 204 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 SCHIP1Q9P0W5 487 aaPredicted RBP19.96■□□□□ 0.79
CHKB-201ENST00000406938 ADAM21Q9UKJ8 722 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 PCOLCE2Q9UKZ9 415 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 R4GN57 208 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 SDK1Q7Z5N4 2213 aa19.96■□□□□ 0.79
CHKB-201ENST00000406938 ZNF318Q5VUA4 2279 aa19.95■□□□□ 0.79
CHKB-201ENST00000406938 A6NCN8 305 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 OR52A4PA6NMU1 304 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 TRIM13O60858 407 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 S100BP04271 92 aaPredicted RBP19.95■□□□□ 0.78
CHKB-201ENST00000406938 HIST1H2AGP0C0S8 130 aaPredicted RBP19.95■□□□□ 0.78
CHKB-201ENST00000406938 HIST1H2ADP20671 130 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 PRKAA2P54646 552 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 CCSMST1Q4G0I0 132 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 WASH2PQ6VEQ5 465 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 TAF8Q7Z7C8 310 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 SLC22A9Q8IVM8 553 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 PPP1R14CQ8TAE6 165 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 SREK1Q8WXA9 508 aaKnown RBP19.95■□□□□ 0.78
CHKB-201ENST00000406938 HIST1H2AHQ96KK5 128 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 MAGEB18Q96M61 343 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 TMEM237Q96Q45 408 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 HIST1H2AJQ99878 128 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 H2AFJQ9BTM1 129 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 WASH6PQ9NQA3 447 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 IMP3Q9NV31 184 aaKnown RBP19.95■□□□□ 0.78
CHKB-201ENST00000406938 TAAR2Q9P1P5 351 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 TMCO1Q9UM00 188 aa19.95■□□□□ 0.78
CHKB-201ENST00000406938 HALP42357 657 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 DPP6P42658 865 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 ALDH18A1P54886 795 aaKnown RBP19.94■□□□□ 0.78
CHKB-201ENST00000406938 AP1S2P56377 157 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 HNRNPKP61978 463 aaKnown RBP eCLIP19.94■□□□□ 0.782e-21■■■■■ 55.9
CHKB-201ENST00000406938 CDKL1Q00532 357 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 ELOCQ15369 112 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 FBXO48Q5FWF7 155 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 ABRAXAS1Q6UWZ7 409 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 DCUN1D3Q8IWE4 304 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 FBXO15Q8NCQ5 510 aaPredicted RBP19.94■□□□□ 0.78
CHKB-201ENST00000406938 PHC3Q8NDX5 983 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 OR5K2Q8NHB8 316 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 ERVMER34-1Q9H9K5 563 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 CIDEBQ9UHD4 219 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 RPN2P04844 631 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 CFIP05156 583 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 ANXA5P08758 320 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 F3P13726 295 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 DNAJB13P59910 316 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 GNGT1P63211 74 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 SETDB1Q15047 1291 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 RPE65Q16518 533 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 DUOXA1Q1HG43 343 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 CES4AQ5XG92 561 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 ZC3H14Q6PJT7 736 aaKnown RBP19.94■□□□□ 0.78
CHKB-201ENST00000406938 RABEPKQ7Z6M1 372 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 ZNF548Q8NEK5 533 aaPredicted RBP19.94■□□□□ 0.78
CHKB-201ENST00000406938 RAB3IL1Q8TBN0 382 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 LRRC8CQ8TDW0 803 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 LMX1AQ8TE12 382 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 ZNF75CPQ92670 426 aaPredicted RBP19.94■□□□□ 0.78
CHKB-201ENST00000406938 RHBDF1Q96CC6 855 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 CCDC134Q9H6E4 229 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 MANSC1Q9H8J5 431 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 ACSS2Q9NR19 701 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 SPASTQ9UBP0 616 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 TP53BP1Q12888 1972 aaPredicted RBP19.94■□□□□ 0.78
CHKB-201ENST00000406938 VPS13AQ96RL7 3174 aa19.94■□□□□ 0.78
CHKB-201ENST00000406938 MYO1CO00159 1063 aa19.93■□□□□ 0.78
CHKB-201ENST00000406938 SDC3O75056 442 aa19.93■□□□□ 0.78
CHKB-201ENST00000406938 SIX3O95343 332 aaPredicted RBP19.93■□□□□ 0.78
CHKB-201ENST00000406938 SERPINE1P05121 402 aa19.93■□□□□ 0.78
CHKB-201ENST00000406938 MTHFD1P11586 935 aaKnown RBP19.93■□□□□ 0.78
CHKB-201ENST00000406938 AGTR2P50052 363 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms