RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 BNIP2Q12982 314 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
VAPA-202ENST00000400000 CLNKQ7Z7G1 428 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 LRRC52Q8N7C0 313 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 VGLL2Q8N8G2 317 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 OR4E2Q8NGC2 313 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 KCNC2Q96PR1 638 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 PPM1HQ9ULR3 514 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 ERVW-1Q9UQF0 538 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 HBS1LQ9Y450 684 aaKnown RBP13.54□□□□□ -0.24
VAPA-202ENST00000400000 A0A1W2PQ72 361 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 GPR89AB7ZAQ6 455 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 CILPO75339 1184 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 OPN1SWP03999 348 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 GPR89BP0CG08 455 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 HOXB8P17481 243 aaPredicted RBP13.54□□□□□ -0.24
VAPA-202ENST00000400000 CDH4P55283 916 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 ADGRE1Q14246 886 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 FKBP1CQ5VVH2 108 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 RNF43Q68DV7 783 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 PDE12Q6L8Q7 609 aaKnown RBP13.54□□□□□ -0.24
VAPA-202ENST00000400000 CYP2U1Q7Z449 544 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 NLGN4XQ8N0W4 816 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 LPGAT1Q92604 370 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 PGM2Q96G03 612 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 CDC7O00311 574 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 CA9Q16790 459 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 POTEHQ6S545 545 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 NUP54Q7Z3B4 507 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 SPATA19Q7Z5L4 167 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 SNTG1Q9NSN8 517 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 ACVR2AP27037 513 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 GAD2Q05329 585 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 PPP1R8Q12972 351 aaKnown RBP13.54□□□□□ -0.24
VAPA-202ENST00000400000 C5orf22Q49AR2 442 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 ARL13AQ5H913 290 aaPredicted RBP13.54□□□□□ -0.24
VAPA-202ENST00000400000 MPP5Q8N3R9 675 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 TNFRSF25Q93038 417 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 CLK4Q9HAZ1 481 aaKnown RBP13.54□□□□□ -0.24
VAPA-202ENST00000400000 POLE3Q9NRF9 147 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 CA14Q9ULX7 337 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 C5orf60A6NFR6 353 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 ACTR3P61158 418 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 ANKRD26P1Q6NSI1 321 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 S100ZQ8WXG8 99 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 SLC35G5Q96KT7 338 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 NMUR2Q9GZQ4 415 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 AP3M1Q9Y2T2 418 aa13.54□□□□□ -0.24
VAPA-202ENST00000400000 FADS2P1A8MWK0 482 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 NRP1O14786 923 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 DRD4P21917 467 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 RPS27LQ71UM5 84 aaKnown RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 SFRP1Q8N474 314 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 PIGXQ8TBF5 258 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 GIPC3Q8TF64 312 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 HEXDCQ8WVB3 486 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 TFAP2BQ92481 460 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 RIOK2Q9BVS4 552 aaKnown RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 EBF3Q9H4W6 596 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 ANXA2P2A6NMY6 339 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 MMP20O60882 483 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 S100A9P06702 114 aaKnown RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 ANXA2P07355 339 aaKnown RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 MLLT10P55197 1068 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 SPIN3Q5JUX0 258 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 ZNF648Q5T619 568 aaPredicted RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 TMEM203Q969S6 136 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 IRF2BPLQ9H1B7 796 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 CCSER2Q9H7U1 834 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 MTRRQ9UBK8 725 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 PCDHB1Q9Y5F3 818 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 FKBP7Q9Y680 259 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 YJEFN3A6XGL0 299 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 MID1O15344 667 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 KLK1P06870 262 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 LILRA4P59901 499 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 CD47Q08722 323 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 RALGPS1Q5JS13 557 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 BEND4Q6ZU67 534 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 THAP5Q7Z6K1 395 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 TNFAIP8L1Q8WVP5 186 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 DGAT2Q96PD7 388 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 H7C0S8 307 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 TRAP1Q12931 704 aaKnown RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 KLF10Q13118 480 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 PTGES3Q15185 160 aaKnown RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 SLC26A9Q7LBE3 791 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 CPNE8Q86YQ8 564 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 ARL10Q8N8L6 244 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 HCAR2Q8TDS4 363 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 C12orf4Q9NQ89 552 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 TCAF1Q9Y4C2 921 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 KERAO60938 352 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 SLC5A9Q2M3M2 681 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 FAM174BQ3ZCQ3 159 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 TMEM214Q6NUQ4 689 aaKnown RBP13.53□□□□□ -0.24
VAPA-202ENST00000400000 AMBNQ9NP70 447 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 KLRF1Q9NZS2 232 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 MAPRE3Q9UPY8 281 aa13.53□□□□□ -0.24
VAPA-202ENST00000400000 FADS3Q9Y5Q0 445 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms