RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 COL20A1Q9P218 1284 aa8.5□□□□□ -1.05
CTNND1-205ENST00000399050 HMGXB4Q9UGU5 601 aa8.5□□□□□ -1.05
CTNND1-205ENST00000399050 MKLN1Q9UL63 735 aa8.5□□□□□ -1.05
CTNND1-205ENST00000399050 OR10H1Q9Y4A9 318 aa8.5□□□□□ -1.05
CTNND1-205ENST00000399050 MAFBQ9Y5Q3 323 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-205ENST00000399050 C3P01024 1663 aa8.5□□□□□ -1.05
CTNND1-205ENST00000399050 SPATA31A6Q5VVP1 1343 aa8.5□□□□□ -1.05
CTNND1-205ENST00000399050 DUOX1Q9NRD9 1551 aa8.5□□□□□ -1.05
CTNND1-205ENST00000399050 TRAV19A0A0A6YYK7 116 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SLC25A12O75746 678 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SIX3O95343 332 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 IFNA16P05015 189 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 AKR1A1P14550 325 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ECHS1P30084 290 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 UFM1P61960 85 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 PPP1R8Q12972 351 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 CIR1Q86X95 450 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 LSM14AQ8ND56 463 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 OR9I1Q8NGQ6 314 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 CGREF1Q99674 301 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 BARD1Q99728 777 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 EBF1Q9UH73 591 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 RIMKLBQ9ULI2 386 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 GPSM3Q9Y4H4 160 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SMIM28A0A1B0GU29 152 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 RIIAD1A6NNX1 92 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 MAGEB3O15480 346 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 OGNP20774 298 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 CD247P20963 164 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 NDST2P52849 883 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SRSF11Q05519 484 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 TARDBPQ13148 414 aaKnown RBP eCLIP8.49□□□□□ -1.051e-8■■■■□ 21.9
CTNND1-205ENST00000399050 NAE1Q13564 534 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 PRAMEF19Q5SWL8 479 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 MED27Q6P2C8 311 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ASRGL1Q7L266 308 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SERPINA9Q86WD7 417 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SLC37A3Q8NCC5 494 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 TSEN15Q8WW01 171 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ZUFSPQ96AP4 578 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 EXOSC8Q96B26 276 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SLC30A2Q9BRI3 323 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ELAC1Q9H777 363 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 GBA2Q9HCG7 927 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 XPNPEP1Q9NQW7 623 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 HOXC6P09630 235 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 GSTT2BP0CG30 244 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 HDCP19113 662 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 CD72P21854 359 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 PRKCHP24723 683 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SSR2P43308 183 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 AP2S1P53680 142 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 CASP9P55211 416 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 CHIT1Q13231 466 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 MAB21L1Q13394 359 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 TCEA2Q15560 299 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SPRED3Q2MJR0 410 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 FRRS1Q6ZNA5 592 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SLC43A3Q8NBI5 491 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 TMEM74Q96NL1 305 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ZNF696Q9H7X3 374 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ZIM2Q9NZV7 527 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SIRPGQ9P1W8 387 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 NUP50Q9UKX7 468 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ABCG2Q9UNQ0 655 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 RNF6Q9Y252 685 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 COL1A2P08123 1366 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 XPNPEP2O43895 674 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 TSPAN1O60635 241 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 HOXA10P31260 410 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 OGDHQ02218 1023 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 RPL6Q02878 288 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 PTGES3Q15185 160 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 CERS6Q6ZMG9 384 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 LRP10Q7Z4F1 713 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 BRSK1Q8TDC3 778 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ZNF431Q8TF32 576 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ING5Q8WYH8 240 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 MGME1Q9BQP7 344 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 FAM124BQ9H5Z6 455 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 CKLFQ9UBR5 152 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 FKBPLQ9UIM3 349 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 IKZF2Q9UKS7 526 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ZNF214Q9UL59 606 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 PLCL2Q9UPR0 1127 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 XRN1Q8IZH2 1706 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SH3PXD2BA1X283 911 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 OR51F1A6NGY5 319 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 GTPBP1O00178 669 aaKnown RBP8.49□□□□□ -1.05
CTNND1-205ENST00000399050 PITPNM1O00562 1244 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 REM1O75628 298 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 DNTTP04053 509 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ANXA8P13928 327 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 ACSL1P33121 698 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 CLCN4P51793 760 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 XKP51811 444 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 DGKQP52824 942 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 HSPB3Q12988 150 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 SCARB2Q14108 478 aa8.49□□□□□ -1.05
CTNND1-205ENST00000399050 BTBD16Q32M84 506 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms