RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 TXNDC8Q6A555 127 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 KLHL35Q6PF15 583 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 NCEH1Q6PIU2 408 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 SLC44A2Q8IWA5 706 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 KRTCAP2Q8N6L1 136 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 OR52B6Q8NGF0 335 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 ASPSCR1Q9BZE9 553 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 RAD21L1Q9H4I0 556 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 PCDH10Q9P2E7 1040 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 GPC6Q9Y625 555 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 RREB1Q92766 1687 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 MTRF1O75570 445 aaKnown RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 ATE1O95260 518 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 LRG1P02750 347 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 PAX3P23760 479 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 SLC26A3P40879 764 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 UGT3A2Q3SY77 523 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 ZDHHC13Q8IUH4 622 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 PLD3Q8IV08 490 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 P3H2Q8IVL5 708 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 COLGALT2Q8IYK4 626 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 OR5K1Q8NHB7 308 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 MAGED4Q96JG8 741 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 CASD1Q96PB1 797 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 NUDT16L1Q9BRJ7 211 aaKnown RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 NPLQ9BXD5 320 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 NSUN3Q9H649 340 aaKnown RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 GMPPBQ9Y5P6 360 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 AOC2O75106 756 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 SCELO95171 688 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 BMP10O95393 424 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 RPS17P08708 135 aaKnown RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 TOP3AQ13472 1001 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 AAK1Q2M2I8 961 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 USP41Q3LFD5 358 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 ZBED5Q49AG3 693 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 PABPC1LQ4VXU2 614 aaKnown RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 CTSL3PQ5NE16 218 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 TMEM236Q5W0B7 351 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 TBPL2Q6SJ96 375 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 PACRGLQ8N7B6 248 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 LEMD2Q8NC56 503 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 HJURPQ8NCD3 748 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 GPR156Q8NFN8 814 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 BEX2Q9BXY8 128 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 EXOSC4Q9NPD3 245 aaKnown RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 LOC285095A0A1B0GVY8 99 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 HOXA2O43364 376 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 ADAMTS4O75173 837 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 RSL1D1O76021 490 aaKnown RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 B3GALT4O96024 378 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 SERPIND1P05546 499 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 GNAO1P09471 354 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 CCNA2P20248 432 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 VARSP26640 1264 aaKnown RBP4.84□□□□□ -1.63
SMAD4-202ENST00000398417 POU1F1P28069 291 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 BDKRB1P46663 353 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 RAB39AQ14964 217 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 PHKG1Q16816 387 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 ENPP6Q6UWR7 440 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 HID1Q8IV36 788 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 EID3Q8N140 333 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 BBS1Q8NFJ9 593 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 ZFYVE19Q96K21 471 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 DACH2Q96NX9 599 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 SH3BP4Q9P0V3 963 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 FNIP2Q9P278 1114 aa4.84□□□□□ -1.63
SMAD4-202ENST00000398417 ELOVL7A1L3X0 281 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 G3V2T6 193 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 CACNG3O60359 315 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 PEX11BO96011 259 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 PABPC4LP0CB38 370 aaKnown RBP4.84□□□□□ -1.64
SMAD4-202ENST00000398417 RAP2AP10114 183 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 HRH2P25021 359 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 PTGER3P43115 390 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 SLC15A1P46059 708 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 EFR3AQ14156 821 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 TGFBIQ15582 683 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 MANEALQ5VSG8 457 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 CST9Q5W186 159 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 CES5AQ6NT32 575 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 TRIM74Q86UV6 250 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 TRIM73Q86UV7 250 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 ERI1Q8IV48 349 aaKnown RBP4.84□□□□□ -1.64
SMAD4-202ENST00000398417 APCDD1Q8J025 514 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 TMEM199Q8N511 208 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 LMNTD1Q8N9Z9 388 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 FBXO22Q8NEZ5 403 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 CD200R1Q8TD46 325 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 PDP1Q9P0J1 537 aaPredicted RBP4.84□□□□□ -1.64
SMAD4-202ENST00000398417 IFT80Q9P2H3 777 aaPredicted RBP4.84□□□□□ -1.64
SMAD4-202ENST00000398417 PCDHB1Q9Y5F3 818 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 UNC80Q8N2C7 3258 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 AXIN1O15169 862 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 URODP06132 367 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF182P17025 639 aaPredicted RBP4.84□□□□□ -1.64
SMAD4-202ENST00000398417 TPP2P29144 1249 aaPredicted RBP4.84□□□□□ -1.64
SMAD4-202ENST00000398417 MAP2K4P45985 399 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 RAB7AP51149 207 aa4.84□□□□□ -1.64
SMAD4-202ENST00000398417 HK3P52790 923 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms