RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CYP20A1Q6UW02 462 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 GLRX5Q86SX6 157 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 CNTN4Q8IWV2 1026 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 LGI2Q8N0V4 545 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 PELI3Q8N2H9 469 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 CADM2Q8N3J6 435 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 SVOPQ8N4V2 548 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 OR4K2Q8NGD2 314 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 RHOXF1Q8NHV9 184 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 PHF10Q8WUB8 498 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 PIK3R3Q92569 461 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 FKBP10Q96AY3 582 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 TSGA13Q96PP4 275 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 FAM193BQ96PV7 902 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 ACAT2Q9BWD1 397 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 ADNPQ9H2P0 1102 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 TUBB1Q9H4B7 451 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 GKN1Q9NS71 199 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 TBC1D13Q9NVG8 400 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 SMPD4Q9NXE4 827 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 RNF112Q9ULX5 631 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 SNX5Q9Y5X3 404 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 ZFC3H1O60293 1989 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 TDRD15B5MCY1 1934 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 MN1Q10571 1320 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 NPEPPSL1A6NEC2 478 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 C12orf71A8MTZ7 269 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 ERVH48-1M5A8F1 160 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 NME4O00746 187 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 TRIM24O15164 1050 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 SHOXO15266 292 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 NPHS1O60500 1241 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 NIPSNAP2O75323 286 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 ALBP02768 609 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 RBP1P09455 135 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 GSTM1P09488 218 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 FCGR1AP12314 374 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 CD1DP15813 335 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 PSMA4P25789 261 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 RPL9P32969 192 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 EIF2DP41214 584 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 RPS9P46781 194 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 SEPHS1P49903 392 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 CSRP3P50461 194 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 DEFA1P59665 94 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 DEFA3P59666 94 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 NRG1Q02297 640 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 TWF1Q12792 350 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 RBBP7Q16576 425 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 TYSND1Q2T9J0 566 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 ZIK1Q3SY52 487 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 C5orf22Q49AR2 442 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 CYBRD1Q53TN4 286 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 BRMS1LQ5PSV4 323 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 VARS2Q5ST30 1063 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 FAM205BPQ63HN1 556 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 SLC16A12Q6ZSM3 486 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 SPRED1Q7Z699 444 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 RTN4RL1Q86UN2 441 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 GATAD2AQ86YP4 633 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 EPHX4Q8IUS5 362 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 DENND1CQ8IV53 801 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.94□□□□□ -1.62
SSR1-202ENST00000397511 CLYBLQ8N0X4 340 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 TCAIMQ8N3R3 496 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 CDYL2Q8N8U2 506 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 SIDT2Q8NBJ9 832 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 LPCAT1Q8NF37 534 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 OR5H6Q8NGV6 325 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 OR6F1Q8NGZ6 308 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 MAGEE2Q8TD90 523 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 PROX1Q92786 737 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 UBXN10Q96LJ8 280 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 GPR21Q99679 349 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 DGCR6LQ9BY27 220 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 GPR62Q9BZJ7 368 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 MEAF6Q9HAF1 191 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 PRM3Q9NNZ6 103 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 CCM2LQ9NUG4 571 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 POLR3BQ9NW08 1133 aaPredicted RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 TOR4AQ9NXH8 423 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 MAP10Q9P2G4 905 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 ZMYM5Q9UJ78 669 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 NUP50Q9UKX7 468 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 OAZ3Q9UMX2 235 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 POLHQ9Y253 713 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 RWDD3Q9Y3V2 267 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 GOLGA4Q13439 2230 aaKnown RBP4.94□□□□□ -1.62
SSR1-202ENST00000397511 ZNF236Q9UL36 1845 aa4.94□□□□□ -1.62
SSR1-202ENST00000397511 DHRS12A0PJE2 317 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 H0YAE9 185 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 EI24O14681 340 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PSMD3O43242 534 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 CACNG3O60359 315 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 TLR5O60602 858 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 SNX2O60749 519 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 PRLP01236 227 aa4.93□□□□□ -1.62
SSR1-202ENST00000397511 ATXN1LP0C7T5 689 aaKnown RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 ZNF37AP17032 561 aaPredicted RBP4.93□□□□□ -1.62
SSR1-202ENST00000397511 HTR1BP28222 390 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms