RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 H3BM21 787 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 GFYI3L273 518 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 UBXN8O00124 270 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 NOVA1P51513 510 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 HK3P52790 923 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 LAYNQ6UX15 382 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 NUDCD3Q8IVD9 361 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 RGL4Q8IZJ4 473 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 MAGEB18Q96M61 343 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 OXSMQ9NWU1 459 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 OARD1Q9Y530 152 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 TMEM131Q92545 1883 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 SPEGQ15772 3267 aa16.54■□□□□ 0.24
TSPAN4-205ENST00000397406 SYCE1LA8MT33 242 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 A8MT66 165 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 ARHGAP33O14559 1287 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 SCAMP1O15126 338 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 SLC16A5O15375 505 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 PSIP1O75475 530 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 C8GP07360 202 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 FGF3P11487 239 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 VCLP18206 1134 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 TAC1P20366 129 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 CSRP1P21291 193 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 ATP5F1P24539 256 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 ACADLP28330 430 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 SP140Q13342 867 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 TGFBIQ15582 683 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 PHKG1Q16816 387 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 UBE2R2Q712K3 238 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 PDZD3Q86UT5 571 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 SPATS2Q86XZ4 545 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 GPSM1Q86YR5 675 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 HID1Q8IV36 788 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 DEFB124Q8NES8 71 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 CEP76Q8TAP6 659 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 EXT2Q93063 718 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 RDH14Q9HBH5 336 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 TRNAU1APQ9NX07 287 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 KLF15Q9UIH9 416 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 ACSL5Q9ULC5 683 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 KCNK6Q9Y257 313 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 SUPT3HB4E1H0 165 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 TLR4O00206 839 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 BCAT2O15382 392 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 KLK8O60259 260 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 SHOX2O60902 331 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 SUPT3HO75486 399 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 RASGRP1O95267 797 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 TPBGLP0DKB5 382 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 CD59P13987 128 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 BGNP21810 368 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 CLCNKAP51800 687 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 GNGT1P63211 74 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 NFKB2Q00653 900 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 CTBSQ01459 385 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 ABRQ12979 859 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 LRP8Q14114 963 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 LIPMQ5VYY2 423 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 CES4AQ5XG92 561 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 RGS9BPQ6ZS82 235 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 RD3Q7Z3Z2 195 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 PARGQ86W56 976 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 MINDY1Q8N5J2 469 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 OR6Y1Q8NGX8 325 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 SKA2Q8WVK7 121 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 GTPBP2Q9BX10 602 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 SLC12A9Q9BXP2 914 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 ZDHHC5Q9C0B5 715 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 TMEM168Q9H0V1 697 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 TCEAL2Q9H3H9 227 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 CAAP1Q9H8G2 361 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 NUDT4Q9NZJ9 180 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 PDE10AQ9Y233 779 aa16.53■□□□□ 0.24
TSPAN4-205ENST00000397406 ASCC3Q8N3C0 2202 aaKnown RBP16.52■□□□□ 0.24
TSPAN4-205ENST00000397406 VILLO15195 856 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 TRIM13O60858 407 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 SMIM24O75264 130 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 IPO13O94829 963 aaKnown RBP16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 TNFP01375 233 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 ENO2P09104 434 aaPredicted RBP16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 LSP1P33241 339 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 DPP6P42658 865 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 MAPK9P45984 424 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 NXPH1P58417 271 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 DNAJB13P59910 316 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 SHC2P98077 582 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 CHI3L2Q15782 390 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 FRA10AC1Q70Z53 315 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 PDPRQ8NCN5 879 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 SPDYE1Q8NFV5 336 aaPredicted RBP16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 RAB3IL1Q8TBN0 382 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 ZNF75CPQ92670 426 aaPredicted RBP16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 CCDC126Q96EE4 140 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 RMDN2Q96LZ7 410 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 WWP1Q9H0M0 922 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 OSGEPL1Q9H4B0 414 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 MANSC1Q9H8J5 431 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 IL21RQ9HBE5 538 aa16.52■□□□□ 0.23
TSPAN4-205ENST00000397406 PARVBQ9HBI1 364 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms