RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 C10orf53Q8N6V4 93 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 ARL10Q8N8L6 244 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 SPC24Q8NBT2 197 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 CTCFLQ8NI51 663 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 SEPT1Q8WYJ6 367 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 DNASE1L2Q92874 299 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 MTERF3Q96E29 417 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 SLX1AQ9BQ83 275 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 UTP14AQ9BVJ6 771 aaKnown RBP4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 CACNG6Q9BXT2 260 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 LRWD1Q9UFC0 647 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 PCDHGA1Q9Y5H4 931 aa4.78□□□□□ -1.64
HMGB1P10-201ENST00000395823 CLSPNQ9HAW4 1339 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 BICDL2A1A5D9 508 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ELOVL7A1L3X0 281 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 HYKKA2RU49 373 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNF263O14978 683 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 EIF3DO15371 548 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 NME6O75414 186 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 SLC22A3O75751 556 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 MT-ND3P03897 115 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 SNRNP70P08621 437 aaKnown RBP4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 FAM106CPP0CH98 169 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ACP2P11117 423 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 GM2AP17900 193 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 POLR2CP19387 275 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 PSMB4P28070 264 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 PTGER4P35408 488 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 PCYT1AP49585 367 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ASIC1P78348 528 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 TNK1Q13470 666 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 RCN2Q14257 317 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 MORF4L2Q15014 288 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 CALCRLQ16602 461 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 TWISTNBQ3B726 338 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 TXNRD3NBQ6F5E7 133 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNF425Q6IV72 752 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 C11orf87Q6NUJ2 197 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 KLC3Q6P597 504 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ALKBH5Q6P6C2 394 aaKnown RBP4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 RAPH1Q70E73 1250 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 PTOV1Q86YD1 416 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ARHGAP24Q8N264 748 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNF611Q8N823 705 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 OR7G3Q8NG95 312 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 TMEM255BQ8WV15 326 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 SSMEM1Q8WWF3 244 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 FIG4Q92562 907 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 PDLIM5Q96HC4 596 aaKnown RBP4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 TMEM19Q96HH6 336 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 OR1F2PQ96R84 312 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 IL25Q9H293 177 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 TMEM206Q9H813 350 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 CDH20Q9HBT6 801 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 TUFT1Q9NNX1 390 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 IL1RAPL2Q9NP60 686 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ACKR4Q9NPB9 350 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 TCP11L1Q9NUJ3 509 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 OCIAD1Q9NX40 245 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ADPRHL2Q9NX46 363 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 B3GAT1Q9P2W7 334 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 CACNG4Q9UBN1 327 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 ITGA11Q9UKX5 1188 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 MYO6Q9UM54 1294 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 KNSTRNQ9Y448 316 aa4.77□□□□□ -1.65
HMGB1P10-201ENST00000395823 COL3A1P02461 1466 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 DNAJC9-AS1A6NH13 148 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 H3BNX3 289 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 MOCS3O95396 460 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 GLUD1P00367 558 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 SMIM18P0DKX4 95 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 CBLP22681 906 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 SP100P23497 879 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 CD27P26842 260 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 NR4A2P43354 598 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 PSMC4P43686 418 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 GLUD2P49448 558 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 YBEYP58557 167 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 DLK1P80370 383 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 RELQ04864 619 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 CUL3Q13618 768 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 TAZQ16635 292 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 CDO1Q16878 200 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 SLC39A12Q504Y0 691 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 TMEM35AQ53FP2 167 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 CCDC92Q53HC0 331 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 SYT14P1Q58G82 188 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 OR7E24Q6IFN5 339 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 TATDN1Q6P1N9 297 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 FAM122CQ6P4D5 195 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 SYCE2Q6PIF2 218 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 PLXDC2Q6UX71 529 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 LINGO4Q6UY18 593 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 ZNF704Q6ZNC4 412 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 CPSF7Q8N684 471 aaKnown RBP4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 BMPERQ8N8U9 685 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 L3MBTL4Q8NA19 623 aa4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 VANGL1Q8TAA9 524 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P10-201ENST00000395823 FGFBP3Q8TAT2 258 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms