RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 TMTC4Q5T4D3 741 aa17.48■□□□□ 0.39
CXCL12-204ENST00000395793 FAM69BQ5VUD6 431 aa17.48■□□□□ 0.39
CXCL12-204ENST00000395793 CPZQ66K79 652 aa17.48■□□□□ 0.39
CXCL12-204ENST00000395793 PACS1Q6VY07 963 aa17.48■□□□□ 0.39
CXCL12-204ENST00000395793 C1orf54Q8WWF1 131 aa17.48■□□□□ 0.39
CXCL12-204ENST00000395793 TRAPPC9Q96Q05 1148 aa17.48■□□□□ 0.39
CXCL12-204ENST00000395793 MAN2B2Q9Y2E5 1009 aa17.48■□□□□ 0.39
CXCL12-204ENST00000395793 SPENQ96T58 3664 aaKnown RBP17.47■□□□□ 0.39
CXCL12-204ENST00000395793 SLC5A10A0PJK1 596 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 TMEM150CB9EJG8 249 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 BHMG1C9JSJ3 638 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-204ENST00000395793 OR1I1O60431 355 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 SUN1O94901 812 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 GOT2P00505 430 aaKnown RBP17.47■□□□□ 0.39
CXCL12-204ENST00000395793 CAPN1P07384 714 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 FOXK1P85037 733 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 CDH17Q12864 832 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 CHAF1BQ13112 559 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 SEMA5AQ13591 1074 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 SEMA3AQ14563 771 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 SEL1L2Q5TEA6 688 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 FAM198BQ6UWH4 519 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 CDHR3Q6ZTQ4 885 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 ZNF534Q76KX8 674 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 LINC00523Q86TU6 105 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 TRIM73Q86UV7 250 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 AMIGO1Q86WK6 493 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 SLC13A5Q86YT5 568 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-204ENST00000395793 APLFQ8IW19 511 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-204ENST00000395793 DSELQ8IZU8 1212 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 TXLNBQ8N3L3 684 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 FLVCR1-AS1Q8TAF5 88 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 ELMO1Q92556 727 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 HDAC10Q969S8 669 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 LRFN5Q96NI6 719 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 GPR87Q9BY21 358 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 PCMTD2Q9NV79 361 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 ACTR10Q9NZ32 417 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 FARSAQ9Y285 508 aaKnown RBP17.47■□□□□ 0.39
CXCL12-204ENST00000395793 DOPEY2Q9Y3R5 2298 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 CCDC88CQ9P219 2028 aa17.47■□□□□ 0.39
CXCL12-204ENST00000395793 MKRN2OSH3BPM6 223 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 LIN7AO14910 233 aaPredicted RBP17.46■□□□□ 0.39
CXCL12-204ENST00000395793 ARHGAP6O43182 974 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 HCRTR1O43613 425 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 IFNB1P01574 187 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 GSTM1P09488 218 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 MSL3P1P0C860 447 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 GSTM4Q03013 218 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 ACVR1Q04771 509 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 SNX1Q13596 522 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 SIX1Q15475 284 aaPredicted RBP17.46■□□□□ 0.39
CXCL12-204ENST00000395793 TSTD2Q5T7W7 516 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 TCTN3Q6NUS6 607 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 SYVN1Q86TM6 617 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 RNF10Q8N5U6 811 aaKnown RBP17.46■□□□□ 0.39
CXCL12-204ENST00000395793 DNAAF3Q8N9W5 541 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 LKAAEAR1Q8TD35 194 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 ADAMTS17Q8TE56 1095 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 FAM60AQ9NP50 221 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 CASS4Q9NQ75 786 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 SPHK1Q9NYA1 384 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 GUCA1BQ9UMX6 200 aa17.46■□□□□ 0.39
CXCL12-204ENST00000395793 HEATR9A2RTY3 570 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 ERI2A8K979 691 aaKnown RBP17.45■□□□□ 0.38
CXCL12-204ENST00000395793 C2orf74A8MZ97 194 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 MEN1O00255 615 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 UGT2B7P16662 529 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 PEBP1P30086 187 aaKnown RBP17.45■□□□□ 0.38
CXCL12-204ENST00000395793 STIP1P31948 543 aaKnown RBP17.45■□□□□ 0.38
CXCL12-204ENST00000395793 FDFT1P37268 417 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 GABRA4P48169 554 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 RPS15P62841 145 aaKnown RBP17.45■□□□□ 0.38
CXCL12-204ENST00000395793 KLRB1Q12918 225 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 ZIC1Q15915 447 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 IZUMO3Q5VZ72 239 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 ZNF385CQ66K41 422 aaPredicted RBP17.45■□□□□ 0.38
CXCL12-204ENST00000395793 SPESP1Q6UW49 350 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 PPP1R21Q6ZMI0 780 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 UNC5AQ6ZN44 842 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 ENDOVQ8N8Q3 282 aaKnown RBP17.45■□□□□ 0.38
CXCL12-204ENST00000395793 CPT1BQ92523 772 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 ALS2CR12Q96Q35 445 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 RANBP9Q96S59 729 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 FANCEQ9HB96 536 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 PLAGL1Q9UM63 463 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 ASF1AQ9Y294 204 aa17.45■□□□□ 0.38
CXCL12-204ENST00000395793 H3BMH7 237 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 FTH1P02794 183 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 CTSBP07858 339 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 ZSCAN5DPP0CG00 497 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 PTGIRP43119 386 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 GSDMDP57764 484 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 KCTD19Q17RG1 926 aaPredicted RBP17.44■□□□□ 0.38
CXCL12-204ENST00000395793 DEFB110Q30KQ9 67 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 PTCHD3Q3KNS1 767 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 ZNF449Q6P9G9 518 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 AFTPHQ6ULP2 937 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 ASB18Q6ZVZ8 466 aa17.44■□□□□ 0.38
CXCL12-204ENST00000395793 VRK3Q8IV63 474 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms