RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 GPR62Q9BZJ7 368 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 MEAF6Q9HAF1 191 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 TMEM181Q9P2C4 612 aa12.99□□□□□ -0.33
NFKB1-202ENST00000394820 CDH23Q9H251 3354 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 LOC100130705A0A1B0GUX0 176 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 FGF10O15520 208 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 IDH3BO43837 385 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 BMP10O95393 424 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 UGT2B4P06133 528 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 DEFA1P59665 94 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 DEFA3P59666 94 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 ATP6V0D1P61421 351 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 APOFQ13790 326 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 RFTN2Q52LD8 501 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 BRMS1LQ5PSV4 323 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 C6orf141Q5SZD1 244 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 FAM171BQ6P995 826 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 Q6ZPB1 254 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 CAMKK1Q8N5S9 505 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 OR4F6Q8NGB9 312 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 NSMCE3Q96MG7 304 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF556Q9HAH1 456 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 BBIP1A8MTZ0 92 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF99A8MXY4 864 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 RPP40O75818 363 aaKnown RBP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 SLC25A14O95258 325 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 VIPP01282 170 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 LCKP06239 509 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 TNFRSF1BP20333 461 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 ARNTP27540 789 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 MASP1P48740 699 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 MS4A13Q5J8X5 152 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF773Q6PK81 442 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 CYS1Q717R9 158 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 LARP4Q71RC2 724 aaKnown RBP eCLIP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 SYT12Q8IV01 421 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 HID1Q8IV36 788 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 TERB1Q8NA31 727 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 SUSD3Q96L08 255 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 GPR78Q96P69 363 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 MTERF1Q99551 399 aaKnown RBP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 DPH2Q9BQC3 489 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 RHNO1Q9BSD3 238 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 COPS4Q9BT78 406 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 TRIM62Q9BVG3 475 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 EHD1Q9H4M9 534 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 STARD7Q9NQZ5 370 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 TOR4AQ9NXH8 423 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 MAGEL2Q9UJ55 1249 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 XIRP2A4UGR9 3374 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 TCRBV3S1A0A5B6 114 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 TBKBP1A7MCY6 615 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 AIREO43918 545 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 B3GALT4O96024 378 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 RAP2AP10114 183 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 IFI30P13284 250 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 HOXD12P35452 270 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 NFE2Q16621 373 aaPredicted RBP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 CES5AQ6NT32 575 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 DBF4BQ8NFT6 615 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 SLC13A3Q8WWT9 602 aa12.98□□□□□ -0.33
NFKB1-202ENST00000394820 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.98□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF638Q14966 1978 aaKnown RBP12.97□□□□□ -0.33
NFKB1-202ENST00000394820 PLXNB2O15031 1838 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 EFCAB9A8MZ26 197 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 TPST2O60704 377 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 BMP2P12643 396 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 COX7A2P14406 83 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 CD1DP15813 335 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 TCF3P15923 654 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 HPCAL1P37235 193 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 HNF4AP41235 474 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 GJA8P48165 433 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 EMP3P54852 163 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 RUNX1T1Q06455 604 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 CDH18Q13634 790 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 TYW3Q6IPR3 259 aaKnown RBP12.97□□□□□ -0.33
NFKB1-202ENST00000394820 ARMCX6Q7L4S7 300 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 VTCN1Q7Z7D3 282 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 IRGQQ8WZA9 623 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 TMEM203Q969S6 136 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 MYRFLQ96LU7 910 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 SIAEQ9HAT2 523 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 RNF186Q9NXI6 227 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 BTBD3Q9Y2F9 522 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 PCDHB7Q9Y5E2 793 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 TYW5A2RUC4 315 aaKnown RBP12.97□□□□□ -0.33
NFKB1-202ENST00000394820 PER2O15055 1255 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 AOC2O75106 756 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 RASAL1O95294 804 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 MED26O95402 600 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 MLYCDO95822 493 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 CSF2P04141 144 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 ALDH2P05091 517 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 C8BP07358 591 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 CYBAP13498 195 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 MYF6P23409 242 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 SMARCB1Q12824 385 aa12.97□□□□□ -0.33
NFKB1-202ENST00000394820 CLLU1OSQ5K130 101 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms