RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 FAM196AQ6ZSG2 479 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 GLB1L3Q8NCI6 653 aaPredicted RBP13.21□□□□□ -0.29
USP49-203ENST00000394253 LRRN3Q9H3W5 708 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 HCN2Q9UL51 889 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 PIP5K1CO60331 668 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 ATG13O75143 517 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 IL7RP16871 459 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 GSTM2P28161 218 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 XKP51811 444 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 RAB35Q15286 201 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 ANGEL2Q5VTE6 544 aaKnown RBP13.21□□□□□ -0.29
USP49-203ENST00000394253 CAPN13Q6MZZ7 669 aaPredicted RBP13.21□□□□□ -0.29
USP49-203ENST00000394253 FOXR1Q6PIV2 292 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 OR8K3Q8NH51 312 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 CHPT1Q8WUD6 406 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 LINGO1Q96FE5 620 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 TTLL8A6PVC2 850 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 TNFRSF10BO14763 440 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 CRHR1P34998 444 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 AFF3P51826 1226 aaKnown RBP13.21□□□□□ -0.29
USP49-203ENST00000394253 NDUFA9Q16795 377 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 ZSCAN4Q8NAM6 433 aaPredicted RBP13.21□□□□□ -0.29
USP49-203ENST00000394253 SUSD6Q92537 303 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 ARL11Q969Q4 196 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 GTPBP3Q969Y2 492 aaKnown RBP13.21□□□□□ -0.29
USP49-203ENST00000394253 LRRC58Q96CX6 371 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 FANCFQ9NPI8 374 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 MAP4K5Q9Y4K4 846 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 HCRTR2O43614 444 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 GLRA2P23416 452 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 PSEN1P49768 467 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 HMGCS2P54868 508 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 RAB31Q13636 194 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 SIM2Q14190 667 aaPredicted RBP13.21□□□□□ -0.29
USP49-203ENST00000394253 ARL5BQ96KC2 179 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 WACQ9BTA9 647 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 TMED9Q9BVK6 235 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 BRINP2Q9C0B6 783 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 DHX33Q9H6R0 707 aaKnown RBP13.21□□□□□ -0.29
USP49-203ENST00000394253 ABCC13Q9NSE7 274 aa13.21□□□□□ -0.29
USP49-203ENST00000394253 FAM205CA6NFA0 338 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 CREBL2O60519 120 aaPredicted RBP13.21□□□□□ -0.3
USP49-203ENST00000394253 LPOP22079 712 aaPredicted RBP13.21□□□□□ -0.3
USP49-203ENST00000394253 KHKP50053 298 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 CDK3Q00526 305 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 CERCAMQ5T4B2 595 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 UNC5AQ6ZN44 842 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 HJURPQ8NCD3 748 aaPredicted RBP13.21□□□□□ -0.3
USP49-203ENST00000394253 ZNF420Q8TAQ5 688 aaPredicted RBP13.21□□□□□ -0.3
USP49-203ENST00000394253 GRIN3AQ8TCU5 1115 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 ZFP57Q9NU63 452 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 A0A1B0GVM2 712 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 TCAF2A6NFQ2 919 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 IL1R1P14778 569 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 CASRP41180 1078 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 HCAR2Q8TDS4 363 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 COPS5Q92905 334 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 C3orf49Q96BT1 292 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 OVOS2A0A0G2JMS6 1433 aa13.21□□□□□ -0.3
USP49-203ENST00000394253 KHNYNO15037 678 aaKnown RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 SHOXO15266 292 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 RGS9O75916 674 aaPredicted RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 RAB3BP20337 219 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 ZNF155Q12901 538 aaPredicted RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 KLHL6Q8WZ60 621 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 OVCA2Q8WZ82 227 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 TMEM203Q969S6 136 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 VRK1Q99986 396 aaPredicted RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 DNAJB4Q9UDY4 337 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 BTRCQ9Y297 605 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 FGF1P05230 155 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 MAPTP10636 758 aaKnown RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 ANKDD1AQ495B1 522 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 FAM35AQ86V20 835 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 ALLCQ8N6M5 410 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 CEP41Q9BYV8 373 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 SNX15Q9NRS6 342 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 INTS1Q8N201 2190 aaKnown RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 DOCK7Q96N67 2140 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 DLG5Q8TDM6 1919 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 INO80Q9ULG1 1556 aaPredicted RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 CLDN9O95484 217 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 GCNT1Q02742 428 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 TARDBPQ13148 414 aaKnown RBP eCLIP13.2□□□□□ -0.3
USP49-203ENST00000394253 PRKD1Q15139 912 aaPredicted RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 PRPF38BQ5VTL8 546 aaKnown RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 UQCC2Q9BRT2 126 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 MCCC2Q9HCC0 563 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 KLK14Q9P0G3 267 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 GNG8Q9UK08 70 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 FAM186AA6NE01 2351 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 AQP4P55087 323 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 ELOAQ14241 798 aaKnown RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 FAM198BQ6UWH4 519 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 MRPL41Q8IXM3 137 aaKnown RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 MFSD3Q96ES6 412 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 SECISBP2Q96T21 854 aaKnown RBP13.2□□□□□ -0.3
USP49-203ENST00000394253 ACSS3Q9H6R3 686 aa13.2□□□□□ -0.3
USP49-203ENST00000394253 PIH1D1Q9NWS0 290 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms