RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 FFAR3O14843 346 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 RGS13O14921 159 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 GPR42O15529 346 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 KRT20P35900 424 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 CDKN1CP49918 316 aaPredicted RBP15.58■□□□□ 0.08
CKAP4-201ENST00000378026 DAPP51397 102 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 ZNF280AP59817 542 aaPredicted RBP15.58■□□□□ 0.08
CKAP4-201ENST00000378026 PLEKHG6Q3KR16 790 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.58■□□□□ 0.08
CKAP4-201ENST00000378026 KRTCAP2Q8N6L1 136 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 OR4L1Q8NH43 312 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 TMEM40Q8WWA1 233 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 TTYH2Q9BSA4 534 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 SP110Q9HB58 689 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 ARNT2Q9HBZ2 717 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 TRIM39Q9HCM9 518 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 SLC6A13Q9NSD5 602 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 SNX8Q9Y5X2 465 aa15.58■□□□□ 0.08
CKAP4-201ENST00000378026 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.57■□□□□ 0.08
CKAP4-201ENST00000378026 METTL15A6NJ78 407 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 E9PAM4 449 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 CYP7B1O75881 506 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 MLYCDO95822 493 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 NPPAP01160 153 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 MMP2P08253 660 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 AFF1P51825 1210 aaKnown RBP15.57■□□□□ 0.08
CKAP4-201ENST00000378026 E2F2Q14209 437 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 SPANXN4Q5MJ08 99 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 NXNL2Q5VZ03 156 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 ASCC1Q8N9N2 400 aaKnown RBP15.57■□□□□ 0.08
CKAP4-201ENST00000378026 TTC29Q8NA56 475 aaPredicted RBP15.57■□□□□ 0.08
CKAP4-201ENST00000378026 SIDT2Q8NBJ9 832 aaKnown RBP15.57■□□□□ 0.08
CKAP4-201ENST00000378026 DEPDC7Q96QD5 511 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 BCL7BQ9BQE9 202 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 MMP27Q9H306 513 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 ERVK13-1Q9NX77 482 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 TAS2R13Q9NYV9 303 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 SLC25A37Q9NYZ2 338 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 NUP214P35658 2090 aaPredicted RBP15.57■□□□□ 0.08
CKAP4-201ENST00000378026 HHLA1C9JL84 531 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 GABRDO14764 452 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 MSH3P20585 1137 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 SCNN1GP51170 649 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 HK3P52790 923 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 MVKQ03426 396 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 VGLL4Q14135 290 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 ANKRD46Q86W74 232 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 HIPK1Q86Z02 1210 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 ZDHHC21Q8IVQ6 265 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 IL17RDQ8NFM7 739 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 OR7G1Q8NGA0 311 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 Q96MT0 163 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 SMIM14Q96QK8 99 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 NUSAP1Q9BXS6 441 aaKnown RBP15.57■□□□□ 0.08
CKAP4-201ENST00000378026 SYTL2Q9HCH5 934 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 TRPV5Q9NQA5 729 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 ABCG2Q9UNQ0 655 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 SAGE2PA6NJ88 616 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 B3GALT4O96024 378 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 APOA1P02647 267 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 RENBPP51606 427 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 ABRAXAS2Q15018 415 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 SETMARQ53H47 684 aaPredicted RBP15.57■□□□□ 0.08
CKAP4-201ENST00000378026 RAB41Q5JT25 222 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 AGAP6Q5VW22 663 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 Q6ZPB1 254 aaPredicted RBP15.57■□□□□ 0.08
CKAP4-201ENST00000378026 AGAP4Q96P64 663 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 TMEM246Q9BRR3 403 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 ZBED2Q9BTP6 218 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 NUAK2Q9H093 628 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 EHD3Q9NZN3 535 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 VPS4AQ9UN37 437 aa15.57■□□□□ 0.08
CKAP4-201ENST00000378026 ZW10O43264 779 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 NIPSNAP2O75323 286 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 PTTG1O95997 202 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 HSMCR30P0CW71 290 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 ZNF135P52742 658 aaPredicted RBP15.56■□□□□ 0.08
CKAP4-201ENST00000378026 HUNKP57058 714 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 HMGCS1Q01581 520 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 TP53BP2Q13625 1128 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 PTPRNQ16849 979 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 OR8H2Q8N162 312 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 OR8J3Q8NGG0 315 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 EEF1AKMT1Q8WVE0 214 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 GTF2H4Q92759 462 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 ZNF566Q969W8 418 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 PDP1Q9P0J1 537 aaPredicted RBP15.56■□□□□ 0.08
CKAP4-201ENST00000378026 KIF17Q9P2E2 1029 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 TTC3P53804 2025 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 OR2A25A4D2G3 310 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 KMOO15229 486 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 GRK5P34947 590 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 CLCNKBP51801 687 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 FOXD4Q12950 439 aaPredicted RBP15.56■□□□□ 0.08
CKAP4-201ENST00000378026 ZFP69Q49AA0 526 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 PRSS48Q7RTY5 328 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 GPSM1Q86YR5 675 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 MSRB3Q8IXL7 192 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 ATG16L2Q8NAA4 619 aa15.56■□□□□ 0.08
CKAP4-201ENST00000378026 MYLPFQ96A32 169 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms