RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 AP5B1Q2VPB7 878 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 PGS1Q32NB8 556 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 KIAA1841Q6NSI8 718 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 TXNDC11Q6PKC3 985 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 LRRC49Q8IUZ0 686 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 KRTCAP2Q8N6L1 136 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 OR56A4Q8NGH8 313 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 TRIM43Q96BQ3 446 aaPredicted RBP14.9□□□□□ -0.02
MSH5-203ENST00000375750 HERC2P3Q9BVR0 1158 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 ZFP14Q9HCL3 533 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.9□□□□□ -0.02
MSH5-203ENST00000375750 MAGEL2Q9UJ55 1249 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 PCDHGC4Q9Y5F7 938 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 MICAL3Q7RTP6 2002 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 FAM92AA1XBS5 289 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 GUCA1CO95843 209 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 FMO3P31513 532 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 HPCAL1P37235 193 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 GDF5P43026 501 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 HMGCS1Q01581 520 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 KCNC4Q03721 635 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 CTF1Q16619 201 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 C10orf120Q5SQS8 335 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 GLT6D1Q7Z4J2 308 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 OR4F6Q8NGB9 312 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 PNPT1Q8TCS8 783 aaKnown RBP14.9□□□□□ -0.02
MSH5-203ENST00000375750 MYOCQ99972 504 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 HEPHQ9BQS7 1158 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 SPON2Q9BUD6 331 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 CCSER2Q9H7U1 834 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.9□□□□□ -0.023e-9■■□□□ 13
MSH5-203ENST00000375750 ZIM2Q9NZV7 527 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 RBMX2Q9Y388 322 aaKnown RBP14.9□□□□□ -0.02
MSH5-203ENST00000375750 KIAA0100Q14667 2235 aaKnown RBP14.9□□□□□ -0.02
MSH5-203ENST00000375750 EFEMP2O95967 443 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 FGF1P05230 155 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 SLC2A4P14672 509 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 HTR7P34969 479 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 ZNF140P52738 457 aaPredicted RBP14.9□□□□□ -0.02
MSH5-203ENST00000375750 LAIR1Q6GTX8 287 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 MILR1Q7Z6M3 343 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 DSG4Q86SJ6 1040 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 SLCO6A1Q86UG4 719 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 OR2T12Q8NG77 320 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 TSPEARQ8WU66 669 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 NRBF2Q96F24 287 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 SLC47A1Q96FL8 570 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 ABHD8Q96I13 439 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 OSBPL10Q9BXB5 764 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 C8orf4Q9NR00 106 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 SMPD4Q9NXE4 827 aa14.9□□□□□ -0.02
MSH5-203ENST00000375750 SLC12A8A0AV02 714 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 ANKRD28O15084 1053 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 JAK1P23458 1154 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 GJA8P48165 433 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 VBP1P61758 197 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 RPL38P63173 70 aaKnown RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 MAPK11Q15759 364 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 CARTPTQ16568 116 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 FXNQ16595 210 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 ZRANB3Q5FWF4 1079 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 NADSYN1Q6IA69 706 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 CLSTN3Q9BQT9 956 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 ACTR8Q9H981 624 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 TLR8Q9NR97 1041 aaKnown RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 COMMD8Q9NX08 183 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 VNN3Q9NY84 501 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 SLC25A37Q9NYZ2 338 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 ERVK-18Q9QC07 812 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 NUP214P35658 2090 aaPredicted RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 ZBBXA8MT70 800 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 LSM1O15116 133 aaKnown RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 JRKO75564 520 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 GSNP06396 782 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 HLA-DPA1P20036 260 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 OGNP20774 298 aaKnown RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 KCNQ1P51787 676 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 IL10RBQ08334 325 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 DGCR6Q14129 220 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 FAM174BQ3ZCQ3 159 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 RBM48Q5RL73 367 aaKnown RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 SLC8B1Q6J4K2 584 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 GCNT7Q6ZNI0 430 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 MSRB3Q8IXL7 192 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 ZNF555Q8NEP9 628 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 LPCAT1Q8NF37 534 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 CD200R1Q8TD46 325 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 HDAC2Q92769 488 aaKnown RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 MUL1Q969V5 352 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 MTFMTQ96DP5 389 aaKnown RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 CNDP2Q96KP4 475 aaKnown RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 SPATA17Q96L03 361 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 NUSAP1Q9BXS6 441 aaKnown RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 C11orf49Q9H6J7 331 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 MARCH2Q9P0N8 246 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 DNMT3BQ9UBC3 853 aaKnown RBP14.89□□□□□ -0.03
MSH5-203ENST00000375750 MTRRQ9UBK8 725 aa14.89□□□□□ -0.03
MSH5-203ENST00000375750 SLC38A8A6NNN8 435 aa14.88□□□□□ -0.03
MSH5-203ENST00000375750 SYCE1LA8MT33 242 aa14.88□□□□□ -0.03
MSH5-203ENST00000375750 SLC1A7O00341 560 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms