RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 H7C0S8 307 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 SMAPO00193 183 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 CHUKO15111 745 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 GPR39O43194 453 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 UGT1A9O60656 530 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 RASSF9O75901 435 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 DDAH2O95865 285 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 PDGFAP04085 211 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 ZNF8P17098 575 aaPredicted RBP11.87□□□□□ -0.51
LSM2-208ENST00000375661 TYRP1P17643 537 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 NELFEP18615 380 aaKnown RBP11.87□□□□□ -0.51
LSM2-208ENST00000375661 UGT1A6P19224 532 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 UGT1A1P22309 533 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 UGT1A4P22310 534 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 HADHAP40939 763 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 SLC19A1P41440 591 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 SEPHS1P49903 392 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 SH3BP2P78314 561 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 ACVR1Q04771 509 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 DHX9Q08211 1270 aaKnown RBP11.87□□□□□ -0.51
LSM2-208ENST00000375661 UGT8Q16880 541 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 ATP13A5Q4VNC0 1218 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
LSM2-208ENST00000375661 PDPK2PQ6A1A2 396 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 CES3Q6UWW8 571 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 ABRAXAS1Q6UWZ7 409 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 ZDHHC24Q6UX98 284 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 WASH2PQ6VEQ5 465 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 TMEM135Q86UB9 458 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 HPS6Q86YV9 775 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 BBOF1Q8ND07 529 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 CT55Q8WUE5 264 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 TRIM56Q9BRZ2 755 aaKnown RBP11.87□□□□□ -0.51
LSM2-208ENST00000375661 ZSCAN5AQ9BUG6 496 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 SPATA16Q9BXB7 569 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 OSGEPL1Q9H4B0 414 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 UGT1A7Q9HAW7 530 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 UGT1A10Q9HAW8 530 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 UGT1A8Q9HAW9 530 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 MRM3Q9HC36 420 aaKnown RBP11.87□□□□□ -0.51
LSM2-208ENST00000375661 PDE7BQ9NP56 450 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 MLXIPLQ9NP71 852 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 WASH6PQ9NQA3 447 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 KLC4Q9NSK0 619 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 TREX1Q9NSU2 369 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 SEMA5BQ9P283 1151 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 ZNF624Q9P2J8 865 aaPredicted RBP11.87□□□□□ -0.51
LSM2-208ENST00000375661 ATXN10Q9UBB4 475 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 SOX13Q9UN79 622 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 MAP4K5Q9Y4K4 846 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 SLC30A1Q9Y6M5 507 aa11.87□□□□□ -0.51
LSM2-208ENST00000375661 SPENQ96T58 3664 aaKnown RBP11.87□□□□□ -0.51
LSM2-208ENST00000375661 ESYT3A0FGR9 886 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 CCDC162PA2VCL2 907 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 AGAP14A8MT82 685 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 KMOO15229 486 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 BANF1O75531 89 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 SRP72O76094 671 aaKnown RBP11.86□□□□□ -0.51
LSM2-208ENST00000375661 SORBS2O94875 1100 aaKnown RBP11.86□□□□□ -0.51
LSM2-208ENST00000375661 PRSS56P0CW18 603 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 NMBRP28336 390 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 MC4RP32245 332 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 CAPZBP47756 277 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 LEPRP48357 1165 aaKnown RBP11.86□□□□□ -0.51
LSM2-208ENST00000375661 PGDP52209 483 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 GUCY2DQ02846 1103 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 CBLBQ13191 982 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 LAMB3Q13751 1172 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 AGAP9Q5VTM2 703 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 CACHD1Q5VU97 1274 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 NLRP9Q7RTR0 991 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 SYVN1Q86TM6 617 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 LRRTM4Q86VH4 590 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 IGDCC3Q8IVU1 814 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 ZNF398Q8TD17 642 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 UBXN4Q92575 508 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 PEX13Q92968 403 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 MFSD3Q96ES6 412 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 VPS35Q96QK1 796 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 WDR83Q9BRX9 315 aaKnown RBP11.86□□□□□ -0.51
LSM2-208ENST00000375661 TIMM29Q9BSF4 260 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 SLC25A23Q9BV35 468 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 ACTL8Q9H568 366 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 SLC40A1Q9NP59 571 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 SCHIP1Q9P0W5 487 aaPredicted RBP11.86□□□□□ -0.51
LSM2-208ENST00000375661 RARRES3Q9UL19 164 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 CACNA1DQ01668 2161 aa11.86□□□□□ -0.51
LSM2-208ENST00000375661 MED13Q9UHV7 2174 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 FAM237BA0A1B0GVD1 139 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 MAGEB16A2A368 324 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 OR51F1A6NGY5 319 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 NDC80O14777 642 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 VEGFDO43915 354 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 SLC25A14O95258 325 aaPredicted RBP11.85□□□□□ -0.51
LSM2-208ENST00000375661 PRAMEF1O95521 474 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 ZNF7P17097 686 aaPredicted RBP11.85□□□□□ -0.51
LSM2-208ENST00000375661 PTPN4P29074 926 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 CDKN1CP49918 316 aaPredicted RBP11.85□□□□□ -0.51
LSM2-208ENST00000375661 PLTPP55058 493 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 RPS15P62841 145 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms