RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 BRF2Q9HAW0 419 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 BRD7Q9NPI1 651 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 CPQQ9Y646 472 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 ASLP04424 464 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 PAX7P23759 505 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 BNIP1Q12981 228 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 FAM13CQ8NE31 585 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 GLIS3Q8NEA6 775 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 CSPG4P5Q96PW8 444 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 LHX5Q9H2C1 402 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 NR2E1Q9Y466 385 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 AK5Q9Y6K8 562 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 CACNA1FO60840 1977 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 CYP3A7-CYP3A51PA0A087WV96 503 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 MFSD11O43934 449 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 GOT2P00505 430 aaKnown RBP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 CYP3A7P24462 503 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 CRHR1P34998 444 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 SELENOVP59797 346 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 AUHQ13825 339 aaKnown RBP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 GDF6Q6KF10 455 aaPredicted RBP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 PLCZ1Q86YW0 608 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 MKL1Q969V6 931 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 PCDHGC4Q9Y5F7 938 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 CSTBP04080 98 aaKnown RBP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 MARCKSL1P49006 195 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 OCLNQ16625 522 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 SIDT2Q8NBJ9 832 aaKnown RBP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 CHIAQ9BZP6 476 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 ZNF878C9JN71 531 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 TSPAN1O60635 241 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 SRCP12931 536 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 EFNA1P20827 205 aaPredicted RBP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 SEPHS1P49903 392 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 TYSND1Q2T9J0 566 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 PRAMEF17Q5VTA0 474 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 ARMCX6Q7L4S7 300 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 PNPLA2Q96AD5 504 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 SLC22A18Q96BI1 424 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 ACSS3Q9H6R3 686 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 FADS3Q9Y5Q0 445 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 ZNF536O15090 1300 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 PREX1Q8TCU6 1659 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 MEGF6O75095 1541 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 NCOA3Q9Y6Q9 1424 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 PRAMEF33A0A0G2JMD5 474 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 hCG_2039718K7EN88 272 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 PRAMEF10O60809 474 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 TACSTD2P09758 323 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 RPL5P46777 297 aaKnown RBP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 ITGB3BPQ13352 177 aaPredicted RBP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 LRRC32Q14392 662 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 OR4K17Q8NGC6 315 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 ABHD5Q8WTS1 349 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 PIWIL1Q96J94 861 aaKnown RBP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 A0A0J9YVX5 310 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 METTL21EPA6NDL7 271 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 AAGABQ6PD74 315 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 Q8N9G6 341 aaPredicted RBP12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 TTLQ8NG68 377 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 ALG2Q9H553 416 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 PCDHB3Q9Y5E6 796 aa12.85□□□□□ -0.35
SLC44A1-202ENST00000374723 MEIS2O14770 477 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 ENTPD5O75356 428 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 VARS2Q5ST30 1063 aaKnown RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 CARS2Q9HA77 564 aaKnown RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 CENPMQ9NSP4 180 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 CHD4Q14839 1912 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 SNX3O60493 162 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 ZNF16P17020 682 aaPredicted RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 HTR7P34969 479 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 NSG1P42857 185 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 CLCQ05315 142 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 TARDBPQ13148 414 aaKnown RBP eCLIP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 SNTA1Q13424 505 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 OR7D4Q8NG98 312 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 LNX1Q8TBB1 728 aaPredicted RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 LENG1Q96BZ8 264 aaPredicted RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 TRMT61BQ9BVS5 477 aaKnown RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 POLR3BQ9NW08 1133 aaPredicted RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 LYARQ9NX58 379 aaKnown RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 PCDHGC3Q9UN70 934 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 CBFA2T3O75081 653 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 PRKCDQ05655 676 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 REP15Q6BDI9 236 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 GIPC3Q8TF64 312 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 IRGQQ8WZA9 623 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 DGCR14Q96DF8 476 aaKnown RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 OR2AG1Q9H205 316 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 SDHAF3Q9NRP4 125 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 PARPBPQ9NWS1 579 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 RCOR3Q9P2K3 495 aaPredicted RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 ITGB1BP2Q9UKP3 347 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 ANGPTL1O95841 491 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 AP2S1P53680 142 aaPredicted RBP12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 FPGSQ05932 587 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 GPM6BQ13491 265 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 PDSS1Q5T2R2 415 aa12.84□□□□□ -0.35
SLC44A1-202ENST00000374723 MLIPQ5VWP3 458 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms