RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 MRPS23Q9Y3D9 190 aaKnown RBP17.91■□□□□ 0.46
RXRB-202ENST00000374685 OARD1Q9Y530 152 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 PTPRSQ13332 1948 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 LTBP2Q14767 1821 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 RSL1D1O76021 490 aaKnown RBP17.91■□□□□ 0.46
RXRB-202ENST00000374685 CKMT2P17540 419 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 METAP1P53582 386 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 HTRA4P83105 476 aaPredicted RBP17.91■□□□□ 0.46
RXRB-202ENST00000374685 FPGSQ05932 587 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 GPR33Q49SQ1 333 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 PROKR1Q8TCW9 393 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 SLCO4A1Q96BD0 722 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 RHBDF1Q96CC6 855 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 C1QTNF3Q9BXJ4 246 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 ACTR8Q9H981 624 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 GID8Q9NWU2 228 aa17.91■□□□□ 0.46
RXRB-202ENST00000374685 PTBP2Q9UKA9 531 aaKnown RBP17.91■□□□□ 0.46
RXRB-202ENST00000374685 TRBV5-4A0A0C4DH59 114 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 PRSS51A0A1B0GVH4 220 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 SAC3D1A6NKF1 404 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 PLK4O00444 970 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 KPNA3O00505 521 aaPredicted RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 PEX1O43933 1283 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 VPS4BO75351 444 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 HSPA8P11142 646 aaKnown RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 HLA-EP13747 358 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 RPS3P23396 243 aaKnown RBP eCLIP17.9■□□□□ 0.46
RXRB-202ENST00000374685 PDK3Q15120 406 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 SPATA19Q7Z5L4 167 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 RNF175Q8N4F7 328 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 ROPN1LQ96C74 230 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 RAD9AQ99638 391 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 CD244Q9BZW8 370 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 PCDH12Q9NPG4 1184 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 WBP1LQ9NX94 342 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 ZNF490Q9ULM2 529 aaPredicted RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 ERVW-1Q9UQF0 538 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 DENND4CQ5VZ89 1909 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 NUP214P35658 2090 aaPredicted RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 A0A1W2PP18 115 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 ANTXRLA6NF34 631 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 NNMTP40261 264 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 CSNK1DP48730 415 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 MTPNP58546 118 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 RHDQ02161 417 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 TSTA3Q13630 321 aaPredicted RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 PCBP2Q15366 365 aaKnown RBP eCLIP17.9■□□□□ 0.462e-7■■■□□ 15.2
RXRB-202ENST00000374685 KLHL35Q6PF15 583 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 FBXO46Q6PJ61 603 aaPredicted RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 CYP20A1Q6UW02 462 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 MACC1Q6ZN28 852 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 SLC22A15Q8IZD6 547 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 PDLIM5Q96HC4 596 aaKnown RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 RIOK2Q9BVS4 552 aaKnown RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 TMEM106CQ9BVX2 250 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 DDX18Q9NVP1 670 aaKnown RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 MAFFQ9ULX9 164 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 PABPN1LA6NDY0 278 aaKnown RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 TMEM202A6NGA9 273 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 BBIP1A8MTZ0 92 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 SEC22BO75396 215 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 TFAP2AP05549 437 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 EPB42P16452 691 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 HOXD12P35452 270 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 CDKL1Q00532 357 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 TMEM240Q5SV17 173 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 IYDQ6PHW0 289 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 ELMSAN1Q6PJG2 1045 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 EFL1Q7Z2Z2 1120 aaKnown RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 LILRA3Q8N6C8 439 aaPredicted RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 PDPRQ8NCN5 879 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 ELMO1Q92556 727 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 ECHDC3Q96DC8 303 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 COQ10BQ9H8M1 238 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 SARDHQ9UL12 918 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 CNOT6Q9ULM6 557 aaKnown RBP17.9■□□□□ 0.46
RXRB-202ENST00000374685 TMEM98Q9Y2Y6 226 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 COQ6Q9Y2Z9 468 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 TMED5Q9Y3A6 229 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 AP4B1Q9Y6B7 739 aa17.9■□□□□ 0.46
RXRB-202ENST00000374685 A0A1W2PQ67 120 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 KANSL1LA0AUZ9 987 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 TMEM247A6NEH6 219 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 CASQ2O14958 399 aaPredicted RBP17.89■□□□□ 0.45
RXRB-202ENST00000374685 STK16O75716 305 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 CTSLP07711 333 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 OR56A5P0C7T3 313 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 CD9P21926 228 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 ABRQ12979 859 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 RCAN2Q14206 197 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 GRIN2CQ14957 1233 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 METTL3Q86U44 580 aaKnown RBP17.89■□□□□ 0.45
RXRB-202ENST00000374685 C12orf40Q86WS4 652 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 C7orf61Q8IZ16 206 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 MRPL40Q9NQ50 206 aaKnown RBP17.89■□□□□ 0.45
RXRB-202ENST00000374685 PFDN4Q9NQP4 134 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 KCTD5Q9NXV2 234 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 PDE10AQ9Y233 779 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 CROCCQ5TZA2 2017 aa17.89■□□□□ 0.45
RXRB-202ENST00000374685 UPK3BL1B0FP48 263 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms