RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 COL2A1P02458 1487 aaPredicted RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 ACKR2O00590 384 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 BET1O15155 118 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 PRKCBP05771 671 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 NR3C2P08235 984 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 ATF4P18848 351 aaPredicted RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 ATICP31939 592 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 KRT20P35900 424 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 GZMKP49863 264 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 MLLT6P55198 1093 aaPredicted RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 SNTA1Q13424 505 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 SOWAHCQ53LP3 525 aaPredicted RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 XRRA1Q6P2D8 792 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 DLEU7Q6UYE1 221 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 DPP9Q86TI2 863 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 SYVN1Q86TM6 617 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 TMEM192Q8IY95 271 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 FLCNQ8NFG4 579 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 ST13P5Q8NFI4 369 aaPredicted RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 OR10T2Q8NGX3 314 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 RHBDF1Q96CC6 855 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 CCDC115Q96NT0 180 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 PSKH2Q96QS6 385 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 SAGE1Q9NXZ1 904 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 SLC2A6Q9UGQ3 507 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 ADGRE2Q9UHX3 823 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 ERVW-1Q9UQF0 538 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 GMPPBQ9Y5P6 360 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 CCL15-CCL14A0A0B4J2E2 113 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 DCLK1O15075 740 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 GSTA4O15217 222 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 TIE1P35590 1138 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 ATN1P54259 1190 aaPredicted RBP12.68□□□□□ -0.38
PRPF4-201ENST00000374198 ARPP19P56211 112 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 NFKB2Q00653 900 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 SEMA3BQ13214 749 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 MAD2L1BPQ15013 274 aaPredicted RBP12.68□□□□□ -0.38
PRPF4-201ENST00000374198 CCL15Q16663 113 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 TIGD6Q17RP2 521 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 MPZL3Q6UWV2 235 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 SLC46A3Q7Z3Q1 461 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 UBE2Q1Q7Z7E8 422 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 CYP4Z1Q86W10 505 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 DPP10Q8N608 796 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 PAF1Q8N7H5 531 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 LHFPL5Q8TAF8 219 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 HPDLQ96IR7 371 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRPF4-201ENST00000374198 TNKS2Q9H2K2 1166 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 COL1A2P08123 1366 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 FAM234BA2RU67 622 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 ATP6V1G2-DDX39BF2Z307 99 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 SLC9A3R1O14745 358 aaPredicted RBP12.68□□□□□ -0.38
PRPF4-201ENST00000374198 AKR7A2O43488 359 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 RGS20O76081 388 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 PRR35P0CG20 571 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 SOX6P35712 828 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 ISCA2Q86U28 154 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 ZNF583Q96ND8 569 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 BRINP2Q9C0B6 783 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 RPF1Q9H9Y2 349 aaKnown RBP12.68□□□□□ -0.38
PRPF4-201ENST00000374198 ZNF302Q9NR11 478 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 COQ3Q9NZJ6 369 aa12.68□□□□□ -0.38
PRPF4-201ENST00000374198 TRMT6Q9UJA5 497 aaKnown RBP12.68□□□□□ -0.38
PRPF4-201ENST00000374198 MAFBQ9Y5Q3 323 aaPredicted RBP12.68□□□□□ -0.38
PRPF4-201ENST00000374198 TRIP11Q15643 1979 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 SLC12A8A0AV02 714 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 A8MX80 341 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 RECQL5O94762 991 aaPredicted RBP12.67□□□□□ -0.38
PRPF4-201ENST00000374198 SIX3O95343 332 aaPredicted RBP12.67□□□□□ -0.38
PRPF4-201ENST00000374198 BTBD16Q32M84 506 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 ZNF789Q5FWF6 425 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 COL13A1Q5TAT6 717 aaPredicted RBP12.67□□□□□ -0.38
PRPF4-201ENST00000374198 FAM171BQ6P995 826 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 LRRC8DQ7L1W4 858 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 YIPF7Q8N8F6 280 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 OR4M2Q8NGB6 313 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 TSPAN17Q96FV3 270 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 NIFKQ9BYG3 293 aaKnown RBP12.67□□□□□ -0.38
PRPF4-201ENST00000374198 OR51E2Q9H255 320 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 LIN7BQ9HAP6 207 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 CCDC182A6NF36 153 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 LRRC14BA6NHZ5 514 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 ANKRD28O15084 1053 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 OR2B3O76000 313 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 ALDH1A1P00352 501 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 ZNF30P17039 623 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 TNFSF8P32971 234 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 LIMK1P53667 647 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 SNRPD2P62316 118 aaKnown RBP12.67□□□□□ -0.38
PRPF4-201ENST00000374198 IL1RL1Q01638 556 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 SLC14A2Q15849 920 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 ARMCX4Q5H9R4 360 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 LETMD1Q6P1Q0 360 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 PDZD4Q76G19 769 aaPredicted RBP12.67□□□□□ -0.38
PRPF4-201ENST00000374198 BNIPLQ7Z465 357 aa12.67□□□□□ -0.38
PRPF4-201ENST00000374198 PTGR2Q8N8N7 351 aaPredicted RBP12.67□□□□□ -0.38
PRPF4-201ENST00000374198 PPHLN1Q8NEY8 458 aaKnown RBP12.67□□□□□ -0.38
PRPF4-201ENST00000374198 OR2T12Q8NG77 320 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms