RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 TTC7AQ9ULT0 858 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-202ENST00000373162 NEU2Q9Y3R4 380 aa17.44■□□□□ 0.38
TRAPPC3-202ENST00000373162 FER1L5A0AVI2 2057 aa17.44■□□□□ 0.38
TRAPPC3-202ENST00000373162 SPTBP11277 2137 aa17.44■□□□□ 0.38
TRAPPC3-202ENST00000373162 SLC9B1P1A6NJY1 282 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 MT-ND3P03897 115 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 DLSTP36957 453 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 POLE2P56282 527 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 CRADDP78560 199 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 GPS2Q13227 327 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 GRB7Q14451 532 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 KCNJ11Q14654 390 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 AMIGO1Q86WK6 493 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 VRK3Q8IV63 474 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 REXO1L1PQ8IX06 675 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 TBC1D21Q8IYX1 336 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 SLC22A15Q8IZD6 547 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 OR5K2Q8NHB8 316 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 ELMO1Q92556 727 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 STAMBPL1Q96FJ0 436 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 KIFC1Q9BW19 673 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 CARD6Q9BX69 1037 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 AP1M1Q9BXS5 423 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 IL22Q9GZX6 179 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 XKR8Q9H6D3 395 aa17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 MRM3Q9HC36 420 aaKnown RBP17.43■□□□□ 0.38
TRAPPC3-202ENST00000373162 HECTD1Q9ULT8 2610 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 C21orf140B9A014 251 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 CEP104O60308 925 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 GAS8O95995 478 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 OR56A5P0C7T3 313 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 SFTPCP11686 197 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 NMBRP28336 390 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 PEBP1P30086 187 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 RORAP35398 523 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 LMAN1P49257 510 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 CDK16Q00536 496 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 MC1RQ01726 317 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 PLOD1Q02809 727 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 NFATC3Q12968 1075 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 PRKG2Q13237 762 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 DNASE1L3Q13609 305 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 CYP1B1Q16678 543 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 LDB1Q86U70 411 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 PPHLN1Q8NEY8 458 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 OR2A14Q96R47 310 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 CHRNA10Q9GZZ6 450 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 KCND1Q9NSA2 647 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 ACTR10Q9NZ32 417 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 PADI1Q9ULC6 663 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 PCDHB3Q9Y5E6 796 aa17.42■□□□□ 0.38
TRAPPC3-202ENST00000373162 SLCO2B1O94956 709 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 NTRK1P04629 796 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 CAPN1P07384 714 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 PRKAR1AP10644 381 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 PVRP15151 417 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 TCN2P20062 427 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 CDH3P22223 829 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 AOAHP28039 575 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 NPY2RP49146 381 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 SESN2P58004 480 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 PRAMEP78395 509 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 BASP1P80723 227 aaKnown RBP17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 PRKAA1Q13131 559 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 KCNAB2Q13303 367 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 KRT33BQ14525 404 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 ZIC1Q15915 447 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 PRAMEF17Q5VTA0 474 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 ZNF385CQ66K41 422 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 ARMC6Q6NXE6 501 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 LRRC8BQ6P9F7 803 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 SPESP1Q6UW49 350 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 UNC5AQ6ZN44 842 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 MPP5Q8N3R9 675 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 OR6P1Q8NGX9 317 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 OR1L3Q8NH93 324 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 ARHGAP9Q9BRR9 750 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 SLC25A18Q9H1K4 315 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 SYTL2Q9HCH5 934 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 HOMER3Q9NSC5 361 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 CATSPERZQ9NTU4 200 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 SYBUQ9NX95 663 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 SPHK1Q9NYA1 384 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 ASF1AQ9Y294 204 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 KCNMB2Q9Y691 235 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 PCSK5Q92824 1860 aa17.41■□□□□ 0.38
TRAPPC3-202ENST00000373162 PTPN13Q12923 2485 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 IQCF5A8MTL0 148 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 C2orf74A8MZ97 194 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 PRMT5O14744 637 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 SUV39H1O43463 412 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 HCRTR1O43613 425 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 CPNE3O75131 537 aaKnown RBP17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 CREG1O75629 220 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 SCRG1O75711 98 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 TMEM63AO94886 807 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 UGT2B7P16662 529 aa17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 RPS3P23396 243 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRAPPC3-202ENST00000373162 SHMT2P34897 504 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms