RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 OR7D4Q8NG98 312 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 OR2T29Q8NH02 315 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 UFD1Q92890 307 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 RNF38Q9H0F5 515 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 EBF1Q9UH73 591 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 N6AMT1Q9Y5N5 214 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 FAM86C2PA6NEL3 165 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 ERN1O75460 977 aaKnown RBP15.66■□□□□ 0.1
COL17A1-202ENST00000369733 CD83Q01151 205 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 LINGO4Q6UY18 593 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 CHPFQ8IZ52 775 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 FAM98AQ8NCA5 519 aaKnown RBP15.66■□□□□ 0.1
COL17A1-202ENST00000369733 VMP1Q96GC9 406 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 ANKHQ9HCJ1 492 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 ENO2P09104 434 aaPredicted RBP15.65■□□□□ 0.1
COL17A1-202ENST00000369733 PTGS2P35354 604 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 TUBA3EQ6PEY2 450 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 KLHL35Q6PF15 583 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 CACUL1Q86Y37 369 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 CCDC36Q8IYA8 594 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 MUS81Q96NY9 551 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 FBRSL1Q9HCM7 1045 aaKnown RBP15.65■□□□□ 0.1
COL17A1-202ENST00000369733 POLR1DQ9Y2S0 133 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 ECDO95905 644 aaPredicted RBP15.65■□□□□ 0.1
COL17A1-202ENST00000369733 C1RP00736 705 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 ARSFP54793 590 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 ZBTB6Q15916 424 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 PPP1R3AQ16821 1122 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 ZNF697Q5TEC3 545 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 CEP295NLQ96MC4 621 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 TUBA1CQ9BQE3 449 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 ASF1AQ9Y294 204 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 ATRNL1Q5VV63 1379 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 A0A0J9YVX5 310 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 A0A1W2PRG6 482 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 FAM25EA8MYX2 175 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 CPNE3O75131 537 aaKnown RBP15.65■□□□□ 0.1
COL17A1-202ENST00000369733 SNAP29O95721 258 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 ATP4BP51164 291 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 SYCE2Q6PIF2 218 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 CRYBG2Q8N1P7 616 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 RACGAP1Q9H0H5 632 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 TVP23BQ9NYZ1 205 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 EVLQ9UI08 416 aaPredicted RBP15.65■□□□□ 0.1
COL17A1-202ENST00000369733 FER1L4A9Z1Z3 1794 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 NME6O75414 186 aaPredicted RBP15.65■□□□□ 0.1
COL17A1-202ENST00000369733 PRKACGP22612 351 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 HMGCS1Q01581 520 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 FBXO43Q4G163 708 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 CGB2Q6NT52 195 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 CHST15Q7LFX5 561 aaPredicted RBP15.65■□□□□ 0.1
COL17A1-202ENST00000369733 ZNF557Q8N988 423 aaPredicted RBP15.65■□□□□ 0.1
COL17A1-202ENST00000369733 ACBD6Q9BR61 282 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 SMURF2Q9HAU4 748 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 NMUR1Q9HB89 426 aa15.65■□□□□ 0.1
COL17A1-202ENST00000369733 IFNGP01579 166 aa15.64■□□□□ 0.1
COL17A1-202ENST00000369733 HCAR3P49019 387 aa15.64■□□□□ 0.1
COL17A1-202ENST00000369733 CLCN2P51788 898 aa15.64■□□□□ 0.1
COL17A1-202ENST00000369733 DNAJB13P59910 316 aa15.64■□□□□ 0.1
COL17A1-202ENST00000369733 PAFAH1B3Q15102 231 aaKnown RBP15.64■□□□□ 0.1
COL17A1-202ENST00000369733 GPC2Q8N158 579 aa15.64■□□□□ 0.1
COL17A1-202ENST00000369733 SPPL2BQ8TCT7 592 aa15.64■□□□□ 0.1
COL17A1-202ENST00000369733 ADAMTS10Q9H324 1103 aa15.64■□□□□ 0.1
COL17A1-202ENST00000369733 POLR3BQ9NW08 1133 aaPredicted RBP15.64■□□□□ 0.1
COL17A1-202ENST00000369733 GIMAP2Q9UG22 337 aa15.64■□□□□ 0.1
COL17A1-202ENST00000369733 OR6C75A6NL08 312 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 RASAL1O95294 804 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 ZNHIT3Q15649 155 aaPredicted RBP15.64■□□□□ 0.09
COL17A1-202ENST00000369733 CCDC157Q569K6 752 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 ZDHHC20Q5W0Z9 365 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 CLEC20AQ6ZU45 233 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 PEG10Q86TG7 708 aaKnown RBP15.64■□□□□ 0.09
COL17A1-202ENST00000369733 GALNT12Q8IXK2 581 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 GATA6Q92908 595 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 B3GALT6Q96L58 329 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 RPL36Q9Y3U8 105 aaKnown RBP15.64■□□□□ 0.09
COL17A1-202ENST00000369733 GABBR2O75899 941 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 HIST1H2ABP04908 130 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 RAPSNQ13702 412 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 TARBP2Q15633 366 aaKnown RBP15.64■□□□□ 0.09
COL17A1-202ENST00000369733 WSCD2Q2TBF2 565 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 TMEM236Q5W0B7 351 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 HIST3H2AQ7L7L0 130 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 CXorf40AQ8TE69 158 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 SOCS4Q8WXH5 440 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 HDAC2Q92769 488 aaKnown RBP15.64■□□□□ 0.09
COL17A1-202ENST00000369733 HIST1H2ACQ93077 130 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 TP53INP1Q96A56 240 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 MAGEH1Q9H213 219 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 KCNN2Q9H2S1 579 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 USP29Q9HBJ7 922 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 GALPQ9UBC7 116 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 MYH2Q9UKX2 1941 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 H0YAE9 185 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 SLC2A2P11168 524 aaPredicted RBP15.64■□□□□ 0.09
COL17A1-202ENST00000369733 MYBPC3Q14896 1274 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 ATP6AP1Q15904 470 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 TXNDC5Q8NBS9 432 aaKnown RBP15.64■□□□□ 0.09
COL17A1-202ENST00000369733 SLC35F5Q8WV83 523 aa15.64■□□□□ 0.09
COL17A1-202ENST00000369733 RFKQ969G6 155 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms