RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 SDR39U1Q9NRG7 319 aaPredicted RBP13.42□□□□□ -0.26
SGMS1-202ENST00000361781 TMCC3Q9ULS5 477 aa13.42□□□□□ -0.26
SGMS1-202ENST00000361781 PRKAB1Q9Y478 270 aa13.42□□□□□ -0.26
SGMS1-202ENST00000361781 LAMB2P55268 1798 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 DYTNA2CJ06 578 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 INSIG1O15503 277 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 MTX2O75431 263 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 TNFRSF21O75509 655 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ITGB1P05556 798 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ENO2P09104 434 aaPredicted RBP13.41□□□□□ -0.26
SGMS1-202ENST00000361781 HSD17B1P14061 328 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ARNTP27540 789 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 SLC16A1P53985 500 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ALDH6A1Q02252 535 aaKnown RBP13.41□□□□□ -0.26
SGMS1-202ENST00000361781 SPCS2Q15005 226 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 RFX4Q33E94 735 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 PIK3R6Q5UE93 754 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 AADATQ8N5Z0 425 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 PPP1R14BQ96C90 147 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ZBED3Q96IU2 234 aaPredicted RBP13.41□□□□□ -0.26
SGMS1-202ENST00000361781 TNKS2Q9H2K2 1166 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 AIG1Q9NVV5 245 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 GIT1Q9Y2X7 761 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 CENPXA8MT69 81 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 LOC730098B7Z3J9 87 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 FPGTO14772 594 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 MT-ND2P03891 347 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ALOX5P09917 674 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 GKP32189 559 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 HNF4AP41235 474 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 GJA8P48165 433 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ALDH3B2P48448 385 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 RPIAP49247 311 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 RPS14P62263 151 aaKnown RBP13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ILF2Q12905 390 aaKnown RBP13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ABRAXAS2Q15018 415 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 AAK1Q2M2I8 961 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 CYBRD1Q53TN4 286 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 MARCH8Q5T0T0 291 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 C2orf73Q8N5S3 287 aaPredicted RBP13.41□□□□□ -0.26
SGMS1-202ENST00000361781 OR13J1Q8NGT2 312 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 OR5K1Q8NHB7 308 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 PHF21AQ96BD5 680 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 TSGA13Q96PP4 275 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ACAT2Q9BWD1 397 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 MUC13Q9H3R2 512 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 VAPAQ9P0L0 249 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 TMEM9Q9P0T7 183 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 ZNFX1Q9P2E3 1918 aaKnown RBP13.41□□□□□ -0.26
SGMS1-202ENST00000361781 SUV39H1O43463 412 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 LZTS3O60299 673 aaPredicted RBP13.41□□□□□ -0.26
SGMS1-202ENST00000361781 TBL1XO60907 577 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 TMCC2O75069 709 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 MAGEA8P43361 318 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 CDH12P55289 794 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 IL10RBQ08334 325 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 XKR6Q5GH73 641 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 RBM48Q5RL73 367 aaKnown RBP13.41□□□□□ -0.26
SGMS1-202ENST00000361781 EPHX4Q8IUS5 362 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 GPR65Q8IYL9 337 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 SLC34A3Q8N130 599 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 SCML4Q8N228 414 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 STK40Q8N2I9 435 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 PDPRQ8NCN5 879 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 C7orf57Q8NEG2 295 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 GPR78Q96P69 363 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 C8orf4Q9NR00 106 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 C1orf109Q9NX04 203 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 CD84Q9UIB8 345 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 TTC3P53804 2025 aa13.41□□□□□ -0.26
SGMS1-202ENST00000361781 LCHNA4D1U4 455 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 H0YJX3 145 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 SLC28A1O00337 649 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 GPR32O75388 356 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 TMBIM6P55061 237 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 SCAPQ12770 1279 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 MRPL28Q13084 256 aaKnown RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 COL9A2Q14055 689 aaPredicted RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 SMN1Q16637 294 aaKnown RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 GOLGA7Q7Z5G4 137 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 NDNFQ8TB73 568 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 RPL3LQ92901 407 aaKnown RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 NACC2Q96BF6 587 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 FARSBQ9NSD9 589 aaKnown RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 TRPC4Q9UBN4 977 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 KLHL3Q9UH77 587 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 KLHL20Q9Y2M5 609 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 SCELO95171 688 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 HPCAL1P37235 193 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 SLC26A3P40879 764 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 ERVPABLB-1P60509 514 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 CYP4F8P98187 520 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 RAPSNQ13702 412 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 PARP15Q460N3 678 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 TMEM207Q6UWW9 146 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 UBE2R2Q712K3 238 aaPredicted RBP13.4□□□□□ -0.26
SGMS1-202ENST00000361781 CACUL1Q86Y37 369 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 TTC9BQ8N6N2 239 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 ZNF347Q96SE7 839 aa13.4□□□□□ -0.26
SGMS1-202ENST00000361781 RPS6KA6Q9UK32 745 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms